[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : nadC
DDBJ      :nadC         Quinolinate phosphoribosyl transferase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  673/915 : Eukaryota  143/199 : Viruses  0/175   --->[See Alignment]
c.1.17d.41.2
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->272 1qapA PDBj 3e-31 31.3 %
:RPS:PDB   9->277 3c2vA PDBj 1e-32 26.8 %
:RPS:SCOP  6->113 1qapA2  d.41.2.1 * 8e-23 28.7 %
:RPS:SCOP  114->277 1o4uA1  c.1.17.1 * 9e-21 27.7 %
:HMM:SCOP  1->113 1qapA2 d.41.2.1 * 2.9e-29 33.6 %
:HMM:SCOP  114->279 1o4uA1 c.1.17.1 * 1.7e-47 43.6 %
:RPS:PFM   26->112 PF02749 * QRPTase_N 7e-13 39.1 %
:RPS:PFM   141->276 PF01729 * QRPTase_C 6e-25 41.9 %
:HMM:PFM   114->275 PF01729 * QRPTase_C 2e-51 42.0 162/169  
:HMM:PFM   25->112 PF02749 * QRPTase_N 4.9e-28 36.0 86/88  
:BLT:SWISS 2->277 NADC_RHORU 1e-42 38.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21440.1 GT:GENE nadC GT:PRODUCT Quinolinate phosphoribosyl transferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(607746..608579) GB:FROM 607746 GB:TO 608579 GB:DIRECTION - GB:GENE nadC GB:PRODUCT Quinolinate phosphoribosyl transferase GB:PROTEIN_ID AAZ21440.1 GB:DB_XREF GI:71062437 GB:GENE:GENE nadC LENGTH 277 SQ:AASEQ MPKIKLSNYYIKNKVKLALNEDLYPNGDITSSLVKNSKVIKIKLISNQQAVIAGLEFVKQTFKLIDNKIKFIIKKEEGSIVKKNDVVATIEGRAENILIGERVALNFLSHISGIATKTNQFVKLANKKTKICCTRKTIPTLRVIQKYAVTLGGGTNHRFNLSDEFLIKDNHIASSDIKTLVSLAIKNKKGRKITVEVDNLNQLKKIMGLKFNTVLFDNMNNKTLKAGVKMAKKHYETEASGNVNLKSIKKIAATGVDRVSIGSITHSVPAIDFKFEI GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 2->277|NADC_RHORU|1e-42|38.8|273/296| SEG 127->140|kktkicctrktipt| BL:PDB:NREP 1 BL:PDB:REP 8->272|1qapA|3e-31|31.3|265/289| RP:PDB:NREP 1 RP:PDB:REP 9->277|3c2vA|1e-32|26.8|250/270| RP:PFM:NREP 2 RP:PFM:REP 26->112|PF02749|7e-13|39.1|87/88|QRPTase_N| RP:PFM:REP 141->276|PF01729|6e-25|41.9|136/169|QRPTase_C| HM:PFM:NREP 2 HM:PFM:REP 114->275|PF01729|2e-51|42.0|162/169|QRPTase_C| HM:PFM:REP 25->112|PF02749|4.9e-28|36.0|86/88|QRPTase_N| GO:PFM:NREP 4 GO:PFM GO:0004514|"GO:nicotinate-nucleotide diphosphorylase (carboxylating) activity"|PF02749|IPR002638| GO:PFM GO:0009435|"GO:NAD biosynthetic process"|PF02749|IPR002638| GO:PFM GO:0004514|"GO:nicotinate-nucleotide diphosphorylase (carboxylating) activity"|PF01729|IPR002638| GO:PFM GO:0009435|"GO:NAD biosynthetic process"|PF01729|IPR002638| RP:SCP:NREP 2 RP:SCP:REP 6->113|1qapA2|8e-23|28.7|108/122|d.41.2.1| RP:SCP:REP 114->277|1o4uA1|9e-21|27.7|155/162|c.1.17.1| HM:SCP:REP 1->113|1qapA2|2.9e-29|33.6|113/122|d.41.2.1|1/1|Nicotinate/Quinolinate PRTase N-terminal domain-like| HM:SCP:REP 114->279|1o4uA1|1.7e-47|43.6|165/0|c.1.17.1|1/1|Nicotinate/Quinolinate PRTase C-terminal domain-like| OP:NHOMO 915 OP:NHOMOORG 868 OP:PATTERN ---1-1-111111111-11---111111-1-111111122222111111111111111111-----11 11111-111111-111111-11111111111111111111111111111--111111---1-1-1111111----111-----1211111111111---1-111111111---------------1121122211211111111111121111111111111-1111111111111111111111-111111111111111111111111111111111111-1111111-11---------------1----------------------------------------111111111111111111111111----------11-111111111-1111221111--1--11111221111111----1-1-1111111-----1111111111111----------1-11111111131-11111111111111111--1----11111111111111-11111111111111-------------------111111111111111111111122111111111212221113111111112111-11111111111111111-111111-1111111111111111111111111111121-1-------1111111112321111111111111111111111111111-111111--1111------1111-111111111111-11111111111111111111111111-11111111111111111111111111111111111111--1111111111111111--------------11111111111111111111111111111111111111111111111111111111111111111111111-111111---------------------------------------111-111111 ----11------2111-11111111111111111-111111111-1111-1111-1111111111--1-1--11111111111111---211-1111111111111-1112-211---1-111-11111141---1----1-11----1-1--11--11111111--------21111141111111121211111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 270 STR:RPRED 97.5 SQ:SECSTR #######ccHHHHHHHHHHHHHcHcccccHHHHHcccEEEEEHEEEcccEEcccHHHHHHHHHHTTcEEEEcccTTTTccccccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccEEEccccccTTTHHHHHHHHHHHTcccccccTTccEEEccccTTccccHHHHHHHHHHcTTccEEEEcccHHHHHHHHHHTccEEEcccccHccEEEEccccTTcccEEEEccccTTTHHHHccccccEEEcGGGTTTcccccEEEEE DISOP:02AL 1-4| PSIPRED cccccccHHHHHHHHHHHHHHHccccccEEEEEEccccEEEEEEEEccccEEEcHHHHHHHHHHccccEEEEEEcccccEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHcccccccccccccEEHHHHHHHHHcHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHcccEEEEccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHccccEEEEccccccccEEEEEEEc //