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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : nadE
DDBJ      :nadE         NH(3)-dependent NAD+ synthetase NadE
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  422/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:228 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->210 3fiuA PDBj 2e-26 34.7 %
:RPS:PDB   29->228 2e18A PDBj 1e-22 31.2 %
:RPS:SCOP  36->222 1ee1A  c.26.2.1 * 2e-34 24.3 %
:HMM:SCOP  6->230 1wxiA1 c.26.2.1 * 1.8e-43 33.3 %
:RPS:PFM   70->193 PF02540 * NAD_synthase 2e-21 45.5 %
:HMM:PFM   6->215 PF02540 * NAD_synthase 1.6e-49 36.0 203/242  
:BLT:SWISS 59->193 NADE_CARHZ 5e-28 42.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21952.1 GT:GENE nadE GT:PRODUCT NH(3)-dependent NAD+ synthetase NadE GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1103009..1103695) GB:FROM 1103009 GB:TO 1103695 GB:DIRECTION - GB:GENE nadE GB:PRODUCT NH(3)-dependent NAD+ synthetase NadE GB:PROTEIN_ID AAZ21952.1 GB:DB_XREF GI:71062949 GB:GENE:GENE nadE LENGTH 228 SQ:AASEQ MNKMPSKAQSLIIGISGGIDSSVSSTLSAMTGIKTIVLSMPIKQKSSQHDLSLKHQEWLVKNFDNVEAHTINLDKLFETFESTLSNFDSELGMANSRARIRMTTLYQVAAANKGIVVGTGNKVEDFGVGFYTKYGDGGVDISPIADCNKSEVWEIGKSINILQEIIDAAPTDGLWDDGRTDEGQLGLKYKELEEAMNNVNSINREKYEKIRKINLHKMEPIPVCKIPN GT:EXON 1|1-228:0| BL:SWS:NREP 1 BL:SWS:REP 59->193|NADE_CARHZ|5e-28|42.9|133/243| SEG 10->28|sliigisggidssvsstls| BL:PDB:NREP 1 BL:PDB:REP 31->210|3fiuA|2e-26|34.7|173/238| RP:PDB:NREP 1 RP:PDB:REP 29->228|2e18A|1e-22|31.2|192/256| RP:PFM:NREP 1 RP:PFM:REP 70->193|PF02540|2e-21|45.5|121/208|NAD_synthase| HM:PFM:NREP 1 HM:PFM:REP 6->215|PF02540|1.6e-49|36.0|203/242|NAD_synthase| GO:PFM:NREP 3 GO:PFM GO:0003952|"GO:NAD+ synthase (glutamine-hydrolyzing) activity"|PF02540|IPR003694| GO:PFM GO:0005524|"GO:ATP binding"|PF02540|IPR003694| GO:PFM GO:0009435|"GO:NAD biosynthetic process"|PF02540|IPR003694| RP:SCP:NREP 1 RP:SCP:REP 36->222|1ee1A|2e-34|24.3|181/271|c.26.2.1| HM:SCP:REP 6->230|1wxiA1|1.8e-43|33.3|219/0|c.26.2.1|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 508 OP:NHOMOORG 492 OP:PATTERN 1111111111111111211212211112111211111111111111-1-1322111111111111-11 -----111-----11---------------------1111-------1-11111111111------------------------1--------------111111--------------------11111111111--------1--------------------------------------11111---111111111111111111111111111111111111111112111111111111111111111-111111-1-1111111-111111111111111111111111111111111111111111111111111-11-------------1----------11---111-1-1111-----1111----------------------------------------------------11-121--------------------------------------------------------------1----------111111-111111111111-1111------------------1--1-------1111111---------1-----------1111111----------11111111111111111111111-------1--1-11111111111111111111111-1---11--1111111-111111111111-111111111111111111111111---1111111111111111-111111111---------------------------------1-1---------------------11111212111111111111111111-11111111111111---------------------------------------1-11111-1111-1111-11111-1111111--- --------2111-------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 87.7 SQ:SECSTR ############################HHcGGGEEEEEcccccHHHcTHHHHHHHHHHHHHHHTcEEEEcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHTcEEEccccHHHHHGHTcccTTcTTcccccTTTTccHHHHHHHHHHHTccHHHHHccccccccGTTccHHHHHTccHHHHHHHHTccccccHHHHHHHHHTTGGGcccccccccGG DISOP:02AL 1-6| PSIPRED cccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHEEccccccccccccccHHHHHHHHHHHcccHHHHHccccccccccccccHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEEEccc //