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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : nhaA
DDBJ      :nhaA         Na+/H+ antiporter 1
Swiss-Prot:NHAA_PELUB   RecName: Full=Na(+)/H(+) antiporter nhaA;AltName: Full=Sodium/proton antiporter nhaA;

Homologs  Archaea  0/68 : Bacteria  374/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
:368 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->359 1zcdA PDBj 2e-62 45.1 %
:RPS:PFM   1->362 PF06965 * Na_H_antiport_1 3e-79 49.0 %
:HMM:PFM   1->362 PF06965 * Na_H_antiport_1 9.4e-143 52.1 361/378  
:BLT:SWISS 20->368 NHAA_PELUB e-167 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21812.1 GT:GENE nhaA GT:PRODUCT Na+/H+ antiporter 1 GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(984438..985544) GB:FROM 984438 GB:TO 985544 GB:DIRECTION - GB:GENE nhaA GB:PRODUCT Na+/H+ antiporter 1 GB:PROTEIN_ID AAZ21812.1 GB:DB_XREF GI:71062809 GB:GENE:GENE nhaA LENGTH 368 SQ:AASEQ MLIAAIIALVISNSSLSNLYFDTLNQYLFIGINDFGLKLSVHHWINDLLMAIFFFFVTLEIKREFIQGELSNLKKALLPIIGAVGGMVVPALVYVFINLGNSETLNGWAIPSATDIAFSLGILSLLGSRVPISLKVFLTALAIIDDLGAILIIAFFYSGDLSISYLSLILISYILLLTLNKFGVKKFIPYLIIGAFMWFFTYKSGIHATIAGVLLASTIPHRIKEKDFSLLIKLEHAISPYVAFIIMPIFAFANAGVSLEGLSLTSLLEPVPLGILLGLFVGKQVGVMVVSFIAVKFGVAQMPDKSSWLSLYGVSILTGVGFTMSLFVGNLAFAENIQYIDGVKIGVLAGSLLSTVFGYFILLYASKK GT:EXON 1|1-368:0| SW:ID NHAA_PELUB SW:DE RecName: Full=Na(+)/H(+) antiporter nhaA;AltName: Full=Sodium/proton antiporter nhaA; SW:GN Name=nhaA; OrderedLocusNames=SAR11_1005; SW:KW Antiport; Cell inner membrane; Cell membrane; Complete proteome;Ion transport; Membrane; Sodium; Sodium transport; Transmembrane;Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 20->368|NHAA_PELUB|e-167|100.0|349/390| GO:SWS:NREP 8 GO:SWS GO:0015297|"GO:antiporter activity"|Antiport| GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0006814|"GO:sodium ion transport"|Sodium transport| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 9 TM:REGION 40->61| TM:REGION 76->98| TM:REGION 134->156| TM:REGION 162->184| TM:REGION 201->222| TM:REGION 235->257| TM:REGION 273->295| TM:REGION 310->332| TM:REGION 343->365| SEG 138->154|ltalaiiddlgailiia| SEG 161->177|lsisylslilisyilll| SEG 258->269|sleglsltslle| BL:PDB:NREP 1 BL:PDB:REP 12->359|1zcdA|2e-62|45.1|346/376| RP:PFM:NREP 1 RP:PFM:REP 1->362|PF06965|3e-79|49.0|361/378|Na_H_antiport_1| HM:PFM:NREP 1 HM:PFM:REP 1->362|PF06965|9.4e-143|52.1|361/378|Na_H_antiport_1| GO:PFM:NREP 3 GO:PFM GO:0006814|"GO:sodium ion transport"|PF06965|IPR004670| GO:PFM GO:0006885|"GO:regulation of pH"|PF06965|IPR004670| GO:PFM GO:0016021|"GO:integral to membrane"|PF06965|IPR004670| OP:NHOMO 461 OP:NHOMOORG 383 OP:PATTERN -------------------------------------------------------------------- -1--1---------1------2---1------22221123-312221--21-1113-1112321112121111111111-21------1111-111---1-2111211-1---------------1--------11-----------------------------------------------12----------------------------------------------------------------------------------------------------------------------------------------------2------------11------------1-11---------------1-1111211111-----11-------1111111112-21123112-1-1----1---2--11---1-1--------11111111411211-1------------1112-111--11-----122111111-1--------------1-----------1---------111--1--11---1------------1--1-1--1--1-11--1-12321112--11122-12112222222212111111111-11111111-3--2-2111112111111111111---1----------11111111111111111-11111111111111111112111111111111111111111111111111111111111111111--1------11-1-----111111111111111-------1112-----1111-2121-222211111111-11111111111121----------------2-11----------------------------------------------------- ---------------------------------------1--------------------------------------------------------------------2------------------------------------------------------1--------------23111---------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 94.0 SQ:SECSTR ###########HccccHHHHHHHTTcEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTccTTTcHHHHHHHHHHTTTTHHHHGGGccccTTHHHHTcccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHTTcccTHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHcc##ccGGcccHHHHHHHHHHHHHHHTHHHHHHHHHcccccccccccTHHHHccTTTTHHHHHTTGGGcTTHHHHTcccTTTcccccccGGGGTTHHHHTTccHHHHHHHHHHHcTTccccHHHHHHHHHHHHHTTTcTTT######### DISOP:02AL 223-229| PSIPRED cHHHHHHHHHHHcccHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHEEEEEEcccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //