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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : nrdE
DDBJ      :nrdE         ribonucleotide reductase alpha subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  132/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:273 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   228->264 PF09444 * MRC1 0.00084 29.7 37/145  
:BLT:SWISS 12->119 NQRF_VIBMA 5e-04 25.7 %
:BLT:SWISS 96->253 NRDJ_BRAJA 6e-46 56.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21542.1 GT:GENE nrdE GT:PRODUCT ribonucleotide reductase alpha subunit GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(706918..707739) GB:FROM 706918 GB:TO 707739 GB:DIRECTION - GB:GENE nrdE GB:PRODUCT ribonucleotide reductase alpha subunit GB:NOTE possibly vitamin B12-dependent GB:PROTEIN_ID AAZ21542.1 GB:DB_XREF GI:71062539 GB:GENE:GENE nrdE LENGTH 273 SQ:AASEQ MAKYLVETYYTCSFKVNHYLDDINEAELANLEKRDDGKFEVLDVKLDTRKTKSLDANNKVTETKKIDIITEQSKPKVISKENNTNFVKKINEGVSKRFSMPDRRKGYIQKATIGDHKVYLHTGEYEDGKIGEIFIDTSKEGELVKALMNNFAIAISLGLQYGVPLDEFISAYVDTKFEPSGKVHGNDRIMSASSILDYIFRELAISYQNREDLAHTPSIGGSDRSLPEEENTEDQNQLLKIIKDVTSKGFVRNNYKKNLVDLSDVKISLKGKK GT:EXON 1|1-273:0| BL:SWS:NREP 2 BL:SWS:REP 12->119|NQRF_VIBMA|5e-04|25.7|101/303| BL:SWS:REP 96->253|NRDJ_BRAJA|6e-46|56.5|154/1254| HM:PFM:NREP 1 HM:PFM:REP 228->264|PF09444|0.00084|29.7|37/145|MRC1| OP:NHOMO 135 OP:NHOMOORG 132 OP:PATTERN -------------------------------------------------------------------- 11111-----------------------------------1122---1------------11111111111------------------------------------------------------11111111111---------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------1---------------------------11111-----111111111111111111111111-11112111111-1111111111111111111111111111111111111111111-----------------------------1----------------------------------------------------------------------------------------------------111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 92-101, 219-237, 264-273| PSIPRED cccEEEEEEEEEHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccEEcEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHcccccccccEEEEEEEccEEEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccEEEEEHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHcccHHHHHHHHHHccEEEccccccEEEcccccccccccc //