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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : opuAA
DDBJ      :opuAA        glycine betaine/l-proline transport ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:341 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   39->269 2it1B PDBj 1e-49 44.0 %
:RPS:PDB   33->260 3b5jA PDBj 4e-47 23.7 %
:RPS:SCOP  44->270 1b0uA  c.37.1.12 * 4e-49 35.0 %
:HMM:SCOP  4->76 1h65A_ c.37.1.8 * 0.00078 26.9 %
:HMM:SCOP  44->265 1g2912 c.37.1.12 * 4.5e-68 43.2 %
:RPS:PFM   68->193 PF00005 * ABC_tran 2e-23 50.4 %
:HMM:PFM   68->192 PF00005 * ABC_tran 2.6e-28 37.6 117/118  
:HMM:PFM   272->319 PF12329 * TMF_DNA_bd 7.8e-05 32.6 46/74  
:HMM:PFM   44->73 PF01580 * FtsK_SpoIIIE 0.0001 40.0 30/205  
:BLT:SWISS 6->329 OPUAA_BACSU 6e-84 49.1 %
:PROS 165->179|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22101.1 GT:GENE opuAA GT:PRODUCT glycine betaine/l-proline transport ATP-binding protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1232734..1233759) GB:FROM 1232734 GB:TO 1233759 GB:DIRECTION - GB:GENE opuAA GB:PRODUCT glycine betaine/l-proline transport ATP-binding protein GB:PROTEIN_ID AAZ22101.1 GB:DB_XREF GI:71063098 GB:GENE:GENE opuAA LENGTH 341 SQ:AASEQ MSDPVIKCESVYKIFGSNAKKMLHEANGNVDAKTFQDNGCIVGVNNASFEVVKGEMLVVMGLSGSGKSTLLRCISRLTDATSGKIYIDGQDLLTLNNKELIELRRNKMGMVFQSFALLPHKTVVENIAFPLQIKGIKTQDSINKAMEMVKLVGLDGRENYFPRELSGGQQQRVGIARSLAVEPDIWFLDEPFSALDPLIRKEMQDEFLRLQEKLQKTIMFITHDFDEALRLADRIAIMKDGVIEQLDTPANIVLNPATEYVRKFTEEVPRGKVLKIADLMEKPETENLSDFKVSKNEIIENVAEKILTQEKSVAVTDENNKIVGSVHPSKIIHTVFSREKK GT:EXON 1|1-341:0| BL:SWS:NREP 1 BL:SWS:REP 6->329|OPUAA_BACSU|6e-84|49.1|318/418| PROS 165->179|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 39->269|2it1B|1e-49|44.0|225/361| RP:PDB:NREP 1 RP:PDB:REP 33->260|3b5jA|4e-47|23.7|224/243| RP:PFM:NREP 1 RP:PFM:REP 68->193|PF00005|2e-23|50.4|119/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 68->192|PF00005|2.6e-28|37.6|117/118|ABC_tran| HM:PFM:REP 272->319|PF12329|7.8e-05|32.6|46/74|TMF_DNA_bd| HM:PFM:REP 44->73|PF01580|0.0001|40.0|30/205|FtsK_SpoIIIE| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 44->270|1b0uA|4e-49|35.0|226/258|c.37.1.12| HM:SCP:REP 4->76|1h65A_|0.00078|26.9|52/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 44->265|1g2912|4.5e-68|43.2|222/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 51675 OP:NHOMOORG 1173 OP:PATTERN WWN9UNJMaZaWZVcPoJSPMQNY*PSkpZhVKDDEFEHGHFEUaSXmLT**m9VfSXZNTLKGb19A UctN*ceennrTZQWRSON-NkAAY*OOOOOOuppqo***V*Y*y*xfxofR**zPUkDDx**g*t****heaaa*ebfQ*hlDCEACRQQL6MFJJ--GFTKMLgOYQR9999999CCDCCCCHUQKUbOMWUdSmww**LKK*Y*pt*jjpehTVNGNINFijbm***fKQILLLLRJIGLjYeRP*pCXi*************************gr***js*z*xvy**cnpppplkmnoonmmcheae*jdf**eRhZmxwRS**eYTZnmmmptswwur**zxvzuusqxzsvvdcddbdeeggecc*utihhusvpr***********k*ov***dnnj*vmz**ksWO**yobcjqUZketsRgedPcWUUKJPMKMcX***aXr****************-qu*nh*m***UB**************MMJ**********QPQQQQQQ*ejKSoY*77557776666988BC88A96977A87A7LEDJEE***************y********m********BM**t*pyrw******esqRYKSocHJGFGFFVTRdqnd**TgX*paoxbZqLeaaUVblXbcZZbp*b*KMLTIOPOQOGCCEEEEEEEKUHGHONpqzSxVfLVO*VTWXURXeYTUTVYbZVge5-DKTTO33-222*z**Z**z*******yz-*zy**********vwywvv*****nmlomklmooonolmomlk*tosvvtxU4************34LJFHEFGOPQPSJ*p*bcacdZKQRPNYQVhPRURRITKRTsd*x*zz********m***FFECDFEDFLjus*uuvvu*****SSTRPRROQRFEEE67NWUULMONA9798999*BeFEFEH-FHGGNJEQSPCIQDKKAABbmzbaw*vwtFdO 2444kdL-dL9BXfPGEIDDIMKRHRKFFADADMKIAKGIFHHBCCDCIQMMXVEEIAEFDFCBC8AA2796BED6C2778BAA6E36-GRAEGBI998AA69MJH5MRltUfXnbhLIGDHZMwuA*F**p4wWtLLIGhFQoXFPIDEgDB*GfVTvMj*MvUfHuWj*dgkVDEFD*BBFCIxdd*F**HI*o*qK ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 338-341| PSIPRED ccccEEEEEEEEEEEcccHHHHHHHHHHHHHHHEEcccccEEEEccccEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEEccccHHHcccHHHccccEEEEcccccccccHHHHccccHHHccccHHHHHHHHHHHHHHHccHHHHHcccHHHcccHHHHHHHHHHHHccccEEEEcccHHHccHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHccccccccEEEHHHHHccccccccccccccccHHHHHHHHHHHccccEEEEEEcccEEEEEEEHHHHHHHHHHHHcc //