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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pabB
DDBJ      :pabB         para-aminobenzoate synthase component I
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  763/915 : Eukaryota  122/199 : Viruses  1/175   --->[See Alignment]
d.161.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   64->382 1qdlA PDBj 8e-39 32.0 %
:RPS:PDB   63->385 3bznA PDBj 7e-59 16.7 %
:RPS:SCOP  63->384 1qdlA  d.161.1.1 * 7e-73 29.2 %
:HMM:SCOP  63->385 1i7qA_ d.161.1.1 * 3.1e-78 29.3 %
:RPS:PFM   126->378 PF00425 * Chorismate_bind 1e-41 32.4 %
:HMM:PFM   126->376 PF00425 * Chorismate_bind 5.9e-71 31.7 249/257  
:BLT:SWISS 120->379 PABB_BACSU 9e-43 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21648.1 GT:GENE pabB GT:PRODUCT para-aminobenzoate synthase component I GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 801746..802909 GB:FROM 801746 GB:TO 802909 GB:DIRECTION + GB:GENE pabB GB:PRODUCT para-aminobenzoate synthase component I GB:PROTEIN_ID AAZ21648.1 GB:DB_XREF GI:71062645 GB:GENE:GENE pabB LENGTH 387 SQ:AASEQ MNKKNYLLDLNNSKKPFIIYKSDKGFDLYTDFSKKIILNNNNIEKFINKNNRLKLPYKETDLFIGFFGYEILNNLIDVKIKKQKTINFPKGIFYKPETKIKLPNNLEYKKTRSLNSNDLFKININKKSYKVIFDEFKKKIKSGETYQIKICTKYSNKSEIDALDFFSRLVKSNMAPEAFMIKDKNYSIISCSPENLITKKNNFITTKPIAGTLKKTKKLNKNKALTFFRKNLKESKEHNMIVDMERNDLSKICKPGSVKILKKKIVEEYKDLYHYVSLIGGQLKNRVTSLEIIKAMMPGGSVIGCPKISTLNLLNKQEKQSRNIYTGSFGYLKFNGDMRFNIIIRSILNFKGKSEISVASGVVIDSNAAHEFNENYIKAKSLMDLYK GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 120->379|PABB_BACSU|9e-43|32.7|260/470| SEG 34->51|kkiilnnnniekfinknn| SEG 212->223|tlkktkklnknk| BL:PDB:NREP 1 BL:PDB:REP 64->382|1qdlA|8e-39|32.0|319/415| RP:PDB:NREP 1 RP:PDB:REP 63->385|3bznA|7e-59|16.7|318/430| RP:PFM:NREP 1 RP:PFM:REP 126->378|PF00425|1e-41|32.4|253/258|Chorismate_bind| HM:PFM:NREP 1 HM:PFM:REP 126->376|PF00425|5.9e-71|31.7|249/257|Chorismate_bind| RP:SCP:NREP 1 RP:SCP:REP 63->384|1qdlA|7e-73|29.2|322/415|d.161.1.1| HM:SCP:REP 63->385|1i7qA_|3.1e-78|29.3|321/517|d.161.1.1|1/1|ADC synthase| OP:NHOMO 1962 OP:NHOMOORG 944 OP:PATTERN 11-1--1111111111-112222142222222111111111111111111111111--1--111--11 1111332333342243322-222233222223222223332424112-232222222211221123434221111211----222222222212-1-112-222222222--------------122222222222211111112253523321122222222222234312222222222222222221-233333333331333333223333333233342233333322233333233333333332331----------21-------12-33311111112112222222222211111111111112--222----22-12----------111111111-1-121112443111--222112-112222222-----222112221121122222222222-22222222222-2222222222222222211222222222222222212212123-----------------------------22222222222233332322222222333323322222212222222221222332222222222222222111222-2222122222222-122222222222222122122-22222122222222221222222222222222333333333333333333231-12222-1---142232222223233322-2212223233233222222223335422222222222222222222222222-3333332232322212221122222222332221231333321223334323222226766232422222233222222222223224444444333322222222223222222-222222--------------------------------------1--1-111222 11----1-1---2222211111214222222222222222122222222223232222233322222212222222212222222222-22222222222222222-13------------------------------------------------------------------2122E222224345-421232222 --1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 325 STR:RPRED 84.0 SQ:SECSTR ##############################################################cEEEEEEEEEEEEccHHHHHHHHHTcTTcTTccEEEEEHHHHHHHHHHHTcccccccEEEEccHHHHHHHHHHHHHHHTTTcccEEEEEEEEEEcccccHHHHHHHHHHHcTTcEEEEEEETTEEEEEEEccEEEEEETTEEEEEEEEEEEEccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTTccccEEcccEEEEEEEcccEEEEEEEEEEEccccccHHHHHHHHcccTTTcEEcHHHHHHHHHHHcccccTTTTcEEEEEccTcEEEEEEcccEEEEETTEEEEEEEEEEcTTccHHHHHHHHHHHHHHHHTTTc DISOP:02AL 1-2| PSIPRED cccccEEEEcccccccEEEEEcccccEEEEEcccEEEEEcccHHHHHHHHHHcccccccccEEEEHHHHHHHHHHHccccccccccccccEEEHHHHHHHHccccccccccccccccccEEccccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEcccccHHHHHHHHHHHccccEEEEEEcccEEEEEEccEEEEEEEccEEEEEEccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEccccEEEEcccEEEEEEEEEEEEcccccHHHHHHHHccccccccccHHHHHHHHHHHcccccccEEEEEEEEccccccHHEEEEEEEEEEccEEEEEEccEEcccccHHHHHHHHHHHHHHHHHHHc //