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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pdxH
DDBJ      :pdxH         probable pyridoxamine-phosphate oxidase
Swiss-Prot:PDXH_PELUB   RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;         EC=1.4.3.5;AltName: Full=PNP/PMP oxidase;         Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase;

Homologs  Archaea  0/68 : Bacteria  481/915 : Eukaryota  152/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:208 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->208 1g76A PDBj 3e-41 40.7 %
:RPS:PDB   18->208 1ci0B PDBj 5e-48 36.6 %
:RPS:SCOP  18->208 1ci0A  b.45.1.1 * 1e-48 36.6 %
:HMM:SCOP  18->208 2a2jA1 b.45.1.1 * 2.1e-63 44.9 %
:RPS:PFM   43->107 PF01243 * Pyridox_oxidase 1e-05 36.9 %
:RPS:PFM   167->208 PF10590 * PNPOx_C 3e-09 42.9 %
:HMM:PFM   29->111 PF01243 * Pyridox_oxidase 7.3e-26 39.8 83/89  
:HMM:PFM   167->208 PF10590 * PNPOx_C 2.1e-17 47.6 42/42  
:BLT:SWISS 1->208 PDXH_PELUB e-124 100.0 %
:PROS 177->190|PS01064|PYRIDOX_OXIDASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21434.1 GT:GENE pdxH GT:PRODUCT probable pyridoxamine-phosphate oxidase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 599591..600217 GB:FROM 599591 GB:TO 600217 GB:DIRECTION + GB:GENE pdxH GB:PRODUCT probable pyridoxamine-phosphate oxidase GB:PROTEIN_ID AAZ21434.1 GB:DB_XREF GI:71062431 GB:GENE:GENE pdxH LENGTH 208 SQ:AASEQ MNQKNSLGLNKCFLDKIDPIDLFEVWMNEAKKTELNDPNALALATSDQNNFPSIRMVLLKDFNKDGFVFYTNLNSQKGNELKNNPKASMCFHWKSLLRQVRINGMVQKVSNKVADEYYSSRGYESRIGAWASKQSTVINNRDELLNSIEEYKKKYSNKNDVPRPEHWSGWNLIPTSIEFWLDGESRIHERLKYTKDTEGNWVKSLLSP GT:EXON 1|1-208:0| SW:ID PDXH_PELUB SW:DE RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase; EC=1.4.3.5;AltName: Full=PNP/PMP oxidase; Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase; SW:GN Name=pdxH; OrderedLocusNames=SAR11_0613; SW:KW Complete proteome; Flavoprotein; FMN; Oxidoreductase;Pyridoxine biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->208|PDXH_PELUB|e-124|100.0|208/208| GO:SWS:NREP 3 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0008615|"GO:pyridoxine biosynthetic process"|Pyridoxine biosynthesis| PROS 177->190|PS01064|PYRIDOX_OXIDASE|PDOC00815| BL:PDB:NREP 1 BL:PDB:REP 18->208|1g76A|3e-41|40.7|189/199| RP:PDB:NREP 1 RP:PDB:REP 18->208|1ci0B|5e-48|36.6|191/204| RP:PFM:NREP 2 RP:PFM:REP 43->107|PF01243|1e-05|36.9|65/88|Pyridox_oxidase| RP:PFM:REP 167->208|PF10590|3e-09|42.9|42/42|PNPOx_C| HM:PFM:NREP 2 HM:PFM:REP 29->111|PF01243|7.3e-26|39.8|83/89|Pyridox_oxidase| HM:PFM:REP 167->208|PF10590|2.1e-17|47.6|42/42|PNPOx_C| GO:PFM:NREP 3 GO:PFM GO:0010181|"GO:FMN binding"|PF01243|IPR011576| GO:PFM GO:0016638|"GO:oxidoreductase activity, acting on the CH-NH2 group of donors"|PF10590|IPR019576| GO:PFM GO:0055114|"GO:oxidation reduction"|PF10590|IPR019576| RP:SCP:NREP 1 RP:SCP:REP 18->208|1ci0A|1e-48|36.6|191/205|b.45.1.1| HM:SCP:REP 18->208|2a2jA1|2.1e-63|44.9|185/0|b.45.1.1|1/1|FMN-binding split barrel| OP:NHOMO 703 OP:NHOMOORG 633 OP:PATTERN -------------------------------------------------------------------- ----1---------21111-1111111111111111131211112212-11--11--1--111-1112221-----------1-----111--111---11111111111------------------------1-1--11----11111111----------111-111--1-----1----111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111111111111111111111111111111111-11111111111111111111111111111112111111111111111111111111111111111---------------1-111111111111111111121111111111111121111111111211111111111111----111111111------1-----------------------111111--1------------------------111111111111111111211111111111111-1-11-------11111111111111111-11111111111111111111112111111111111111111111111111111111111111111111-111112322-111111111111111----1-111111111133331111111111111---------2111111111111111111121111111111--111111----------------------------------------------121 ----111-----2211111---12-2------111111-1-1-1111111221211111111111111-1111111111111111111-13111111111121----1-2212121111111111-111281-112111121111-111111-11--1132-1211231212121111-----111132111------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 195 STR:RPRED 93.8 SQ:SECSTR #############cccccHHHHHHHHHHHHHHcccccTTEEEEEEEETTTEEEEEEEEccEEccccEEEEEccccHHHHHHHHccEEEEEEEETTTTEEEEEEEEEEEccHHHHHHHHHHccHHHHHHHHHccTTcccccHHHHHHHHHHHHHHTTccccccccTTEEEEEEEEEEEEEEEccTTcccEEEEEEcccTcccEEEEccc DISOP:02AL 1-4| PSIPRED ccccccccccHHHcccccHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEEEEEEEccccEEEEEccccHHHHHHHHcccEEEEEEcHHHccEEEEEEEEEEcccHHHHHHHcccccccccEEEccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEEEEEccccccccEEEEEEEccccEEEEEEcc //