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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pepA
DDBJ      :pepA         leucyl aminopeptidase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  720/915 : Eukaryota  116/199 : Viruses  0/175   --->[See Alignment]
c.50.1c.56.5
:485 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   185->480 1gytA PDBj 2e-62 45.2 %
:RPS:PDB   122->485 1bllE PDBj e-101 36.3 %
:RPS:SCOP  164->485 1bllE2  c.56.5.3 * e-119 38.4 %
:HMM:SCOP  1->164 1gytA1 c.50.1.1 * 6.2e-06 22.2 %
:HMM:SCOP  164->485 1lamA1 c.56.5.3 * 1.4e-117 50.6 %
:RPS:PFM   171->478 PF00883 * Peptidase_M17 4e-84 53.0 %
:HMM:PFM   170->477 PF00883 * Peptidase_M17 1.9e-115 49.5 305/311  
:HMM:PFM   44->137 PF02789 * Peptidase_M17_N 2.7e-05 23.7 93/125  
:BLT:SWISS 85->485 AMPA_EHRRG e-113 57.3 %
:PROS 397->414|PS00214|FABP
:PROS 330->337|PS00631|CYTOSOL_AP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21535.1 GT:GENE pepA GT:PRODUCT leucyl aminopeptidase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 699939..701396 GB:FROM 699939 GB:TO 701396 GB:DIRECTION + GB:GENE pepA GB:PRODUCT leucyl aminopeptidase GB:PROTEIN_ID AAZ21535.1 GB:DB_XREF GI:71062532 GB:GENE:GENE pepA LENGTH 485 SQ:AASEQ MTIQINYKKISSKKDLANLVLFVDEKFNINNLKKYLSNLEFSYISDLLKNSDLKKDLLSFEVNSKKTVFLVSIKKDIKISDIENLGAKFHSYINNDKKKEYFVNSDTINNKIKNFVGYFLHGLKLKSYEFNIYKSKKNKETVLINVIGNKNKISIQDHLRFKALEEGSFFARDLVSEPGNVLHPDEYAKRINTLKKFGLKINIYDEKKLKKLGMNALLGVGQGSIRGSYLVTMEWNGAKNNSNPLAFVGKGVCFDTGGYSLKPAKFMEDMTYDMAGSATVVGLMKNLAIRKAKINAVGVVGLVENMVSGNAQRPGDIVKSYSGKTIEVLNTDAEGRLVLADALTFTEKKFKPKFMVDLATLTGAIIVSLGSEYAGLFSNDDKLSKQLLEAGDKVEEKLWRMPLHKNFDKLIDSKNADMQNINYVGGAGSTTAAQFLQRFILNKTPWAHLDIAGMAFSKYGGALNSGGATSYGVRLLNQLIEDNYE GT:EXON 1|1-485:0| BL:SWS:NREP 1 BL:SWS:REP 85->485|AMPA_EHRRG|e-113|57.3|396/500| PROS 397->414|PS00214|FABP|PDOC00188| PROS 330->337|PS00631|CYTOSOL_AP|PDOC00548| SEG 45->59|sdllknsdlkkdlls| SEG 72->82|sikkdikisdi| BL:PDB:NREP 1 BL:PDB:REP 185->480|1gytA|2e-62|45.2|281/503| RP:PDB:NREP 1 RP:PDB:REP 122->485|1bllE|e-101|36.3|358/481| RP:PFM:NREP 1 RP:PFM:REP 171->478|PF00883|4e-84|53.0|302/305|Peptidase_M17| HM:PFM:NREP 2 HM:PFM:REP 170->477|PF00883|1.9e-115|49.5|305/311|Peptidase_M17| HM:PFM:REP 44->137|PF02789|2.7e-05|23.7|93/125|Peptidase_M17_N| GO:PFM:NREP 3 GO:PFM GO:0004177|"GO:aminopeptidase activity"|PF00883|IPR000819| GO:PFM GO:0005622|"GO:intracellular"|PF00883|IPR000819| GO:PFM GO:0006508|"GO:proteolysis"|PF00883|IPR000819| RP:SCP:NREP 1 RP:SCP:REP 164->485|1bllE2|e-119|38.4|320/325|c.56.5.3| HM:SCP:REP 1->164|1gytA1|6.2e-06|22.2|162/178|c.50.1.1|1/1|Macro domain-like| HM:SCP:REP 164->485|1lamA1|1.4e-117|50.6|320/325|c.56.5.3|1/1|Zn-dependent exopeptidases| OP:NHOMO 1408 OP:NHOMOORG 844 OP:PATTERN 11-111-----------------------------------------------------------111 111111111112-211111-111111111111111111112222231121111111111122212221112-----------111111-----------1-------1--11111111111111111111-11111111111111111111111111111111111111111111111111111-111-----11111111111111111111111111111-11------11-1111111111111-11111-----------------------------------------------------------------------11-1-----------1---11111---1-------------------1-1-1233311111222222222222222222222222-222222222321222222222222222322232222222222222222222232311111111111111111111111111111122232111111111111111111111111111111111111111111121111111122121111-1111222112211-1-111-111111-1-1111-111112111111111111111111111111111114422112325244444234444444544451-1111211-11133222322222222222-2222222222222222222222222222222222222222222322222222122222222222211121111122221111122222222122223211111111111111111111111111111222222222122232222222222222222222222221111111111--------1---1-13-2221211111221122111----------1-- 1211113-843-223-----------------------------------------------------------------------11-141-113----1113231262548333321-2222231425R21325122-212211222-22122332244212333G55422342212B222113223-312252228 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 364 STR:RPRED 75.1 SQ:SECSTR #########################################################################################################################HHHHHHccccTTccccccccEEEEcEEEEccccHHHHHHHHHHHHHHHHHHHHHHccTTTccHHHHHHHHHHHHHHcccEEEEcHHHHHHTTcHHHHHHHTTcccccEEEEEEEEccccTcccEEEEEcEEEEEccTTcccccTTGGGGGGTTHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEcccTTcccTTEEEEcTTccEEEEccTTcHHHHHHHHHHHHGHGGGcccEEEEEEcccHHHHHHTTTccEEEEEccHHHHHHHHHHHHHHcccEEEccccHHHHHHHccccccEEccccccccHHHHHHHHHHTTcHccccEEEEEcGGGcEEccccTTcccEEccTTHHHHHHHHHHHHc DISOP:02AL 484-486| PSIPRED cEEEEcHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccHHEEEEEEcccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHHHccHHHHccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHcccEEEEEcHHHHHHccccEEEEEccccccccEEEEEEEcccccccccEEEEEEEEEEEcccccccccccHHHHHccccHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccccccEEEcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHcccEEcccccHHHHHHcccccccEEccccccccccHHHHHHHHHHccccccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHcc //