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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pgpA
DDBJ      :pgpA         phosphatidylglycerophosphatase A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  168/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.195.1
:167 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  63->148 1rfzA  a.195.1.1 * 6e-12 24.6 %
:HMM:SCOP  1->162 1rfzA_ a.195.1.1 * 4.7e-27 28.3 %
:RPS:PFM   8->149 PF04608 * PgpA 7e-18 36.2 %
:HMM:PFM   7->159 PF04608 * PgpA 7e-44 36.2 141/143  
:BLT:SWISS 8->149 PGPA_ECOLI 4e-11 30.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21756.1 GT:GENE pgpA GT:PRODUCT phosphatidylglycerophosphatase A GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(928476..928979) GB:FROM 928476 GB:TO 928979 GB:DIRECTION - GB:GENE pgpA GB:PRODUCT phosphatidylglycerophosphatase A GB:PROTEIN_ID AAZ21756.1 GB:DB_XREF GI:71062753 GB:GENE:GENE pgpA LENGTH 167 SQ:AASEQ MINSFNSLLVTMFGLGKIKYMPGTFGSLATVIILYYLFHTLNISPNIILFGLIIIFIYSFYAVSSYIENSENKDPGEIIIDEFLGQSIPIYLYEISHGTTKDGGEAIVYYALFFILFRYFDIMKPFPVNFFDKNFKNSFGVIMDDICAGFYVVLTLVCFMILKNYIL GT:EXON 1|1-167:0| BL:SWS:NREP 1 BL:SWS:REP 8->149|PGPA_ECOLI|4e-11|30.0|130/172| TM:NTM 4 TM:REGION 20->42| TM:REGION 44->66| TM:REGION 102->124| TM:REGION 140->162| SEG 47->57|iilfgliiifi| RP:PFM:NREP 1 RP:PFM:REP 8->149|PF04608|7e-18|36.2|130/142|PgpA| HM:PFM:NREP 1 HM:PFM:REP 7->159|PF04608|7e-44|36.2|141/143|PgpA| GO:PFM:NREP 2 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF04608|IPR007686| GO:PFM GO:0008962|"GO:phosphatidylglycerophosphatase activity"|PF04608|IPR007686| RP:SCP:NREP 1 RP:SCP:REP 63->148|1rfzA|6e-12|24.6|69/164|a.195.1.1| HM:SCP:REP 1->162|1rfzA_|4.7e-27|28.3|145/164|a.195.1.1|1/1|YutG-like| OP:NHOMO 168 OP:NHOMOORG 168 OP:PATTERN -------------------------------------------------------------------- --1----------------------------------------------------------------------------------111-------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-----------------------------------------------------------------11----111-------------1-111--1---11--11111111--11----11----------111-1-----------------1----------------------1--------------11-1--111------11---1111-111----1---------1--1--------------1-------11---11-------11------11-11-------------1-----11111111111-111111111111111111111111---11111111111111111111--11-11111111111111-1-------------111111-11-----1111111111----1--------1------------------11-111111--1--------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED cHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHHHccc //