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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pilY1
DDBJ      :pilY1        Type II Secretion PilY1
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.70.1
:1523 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  791->889 1kb0A2 b.70.1.1 * 0.00012 21.1 %
:RPS:PFM   827->929 PF05567 * Neisseria_PilC 7e-07 43.0 %
:HMM:PFM   821->847 PF01011 * PQQ 5.2e-05 37.0 27/38  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20892.1 GT:GENE pilY1 GT:PRODUCT Type II Secretion PilY1 GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(80345..84916) GB:FROM 80345 GB:TO 84916 GB:DIRECTION - GB:GENE pilY1 GB:PRODUCT Type II Secretion PilY1 GB:NOTE Type IV fimbrial biogenesis protein, PilY1 GB:PROTEIN_ID AAZ20892.1 GB:DB_XREF GI:71061889 GB:GENE:GENE pilY1 LENGTH 1523 SQ:AASEQ MRRTLGDGIPVISSAAIDGNGNRVLTSADKSLGGLYLFNSAGERINFTGTNQSGGSYTRDTWWAGSNTDQRCDYRLRDGSRTTNHLISTTRKYHEARYVTGVTVPGTNISNENLLFAVQFDDGSSSVAVIALDTQYRCRLALTVNSVKHIRGMDISANAAGHIIVGVFGRSGRKNAFQMTCNLNQADCEEITGRGKGQTDVFGRIYDGNRYRLNSDSTRMYISDDGNLYEYATRNVGGQNVISYAWGEKKECRASRNSTINQITQFELSSNDDDIFFVGGSGRELVRVQWTAGYNICTRITGLGTASSLSNAGQAAGNLAADSVRVTNALTAISKSGGRILFSHNSYVDELTEANFTSANRNTAWQIQYGGPKITRLDGAKAAIIAVLTDSTLTSGANFGFGHWNAGEGSQGKTGRRGGKYCHGSGTSCNYYGGWSGNHPAGQSRICTGNSCLNVGIGPEGAGNAIPVVERLGVEWGTDSEAFSQIAHDYFFGPVSPHDPNSDCQLNYVIVIGDGEMSGTGTASTSFQGRTAGRLTRMREELGIKTLMVAYGDGIKASGMNRFNELALVGSCDAAGGEDCEQTIVATTPLELQTELQQKIRQILAERLAFTAPSITATIQQGGSLYQAQFAYEQFGEWKGTILRKTLNADGTVEHDPNAPGNWDAAARVRTQAAGGPTDPGTADSRNIWTPIADQSLDYLGNWDNVNEATAPTLEPEMERLGYVLRNYHSSTSKCGGDDTTDDERDGILRFLAGQDFFDYDGDCDTTELRSHVLGDIYHSQLIEIGAPDGNTQFTDNNQEAYFRTINNYQAFKASQQSRRNILYAGSNSGLLHAFSAETGNEEWAFLPPFLIGKLPTLINSRLDGAIDGFKGGSNAVFGVDGSPVVHDVFMKGLTPEGDVEGSASWHTILFQPFGRGGSGFSVLDVTTPLVRDGLGPMHMFSVYNDYINNVVYIMDNEGEVRELEYFSSSAEISASDEALKAQSNFNEAVTADEAIDSETTTNQDAIAVCQSDADVTGEFKTAGTASCYIGRTFTFSDISFNTPNNQSIPENMINVSEMVDGEFLPVEFSDARMIDGQFVITFDEDKIYNPGGSVNETRETTNIFVQTSCTSSSGIDPFFDYSKLGETWSTPRIVRLPSDIEAEREDPANDKYVAIMGAGMANNNLCAGSALFMVELDNMDEPGKLYGGDQNGGPITIVDTSPSGVALGNDIIETPNGSNINNAVPTSPLVITPDTGFGIPWRGAMVYINDREGKITKINLTDSTKNDAKLFDQTTLFRLNASTTNKRYTFFSMDAGVGVTTKDFWLFGGTGDFNKLGDIDRNMDNILYGIRDFDYPYFKHLNGVTIPSFDDQAFTSTAHQGADNAKSIDDATVCSDVTGDTDASLCPDSAESAWVIHLDTQGDNNSHRKASAPPTLFKGQVYFPVYEPPPGSNRCNIGNAYICVADDECGTNNSHKLVKGAEANGSNCTFIREGVLSELVIFGDKLYANVAGPSEDSDTLYSVIAVPGEILSNTGGWRDTGY GT:EXON 1|1-1523:0| SEG 736->743|ggddttdd| SEG 965->979|eyfsssaeisasdea| RP:PFM:NREP 1 RP:PFM:REP 827->929|PF05567|7e-07|43.0|79/336|Neisseria_PilC| HM:PFM:NREP 1 HM:PFM:REP 821->847|PF01011|5.2e-05|37.0|27/38|PQQ| HM:SCP:REP 791->889|1kb0A2|0.00012|21.1|95/0|b.70.1.1|1/1|Quinoprotein alcohol dehydrogenase-like| OP:NHOMO 56 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------1-------111113--11521--1111--------11---1-------------------21-1------------------------------------1--------------------------------1-----------------------------------------------------------------------------------------------------1111-------------------------------11111----1----1---------------------------------1---2222----------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 408-419, 442-445, 608-618, 1401-1415, 1520-1523| PSIPRED ccccccccccEEEEEEEcccccEEEEEccccccEEEEEcccccEEEEEEcccccccccccEEEccccccccccEEEcccccHHHHHHHHHHHHHHEEEEEEEEccccccccccEEEEEEEccccccEEEEEEccccEEEEEEEEccHHHHccccEEcccccEEEEEEEcccccccEEEEEEcccHHHHHHHcccccccccEEEEEEcccEEEEcccccEEEEcccccEEEEEccccccccEEEEcccccHHHHHHccccHHHEEEEEEccccccEEEEcccccEEEEEEEEccccccccEEcccHHccHHHcccccccccccEEEEEccccEEcccccEEEEccccccccEEEEEEccccccEEEEEEEccccccccccccEEEEEEEccccccccccccccccccccccccccccccccEEccccccccccccccccccccccEEEEcccEEEEEEcccccccccccHHHcccccccHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccccccccEEEccccccccccccccccccccEEEEEEccccccccccccccccEEEHHHHccccccccccEEEccHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEEEEcccccccEEEEEEEEcccccEEEccccccccccHHcccccccccccccccccccEEEEEcccccEEccccccccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccccccccccccccEEcccEEEEEcccEEEEEEccccccccccccccccccccccHHHHHHHHcccccEEEEEccccEEEEEEcccccEEEEEccHHHHHHHHHHccccccccccccccccccEEEEccccEEEEEEEcccccccccccccccEEEEEEcccccccEEEEEEEcccccccccccEEEEEEEccccccEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHccccHHccHHHHccccccccccEEEEEEccccccccccccccEEEEEEEEEEEccEEEcccccccccHHHHHHHHHccccEEEEEEcccEEEccEEEEEEcccEEEccccccccccccEEEEEEEEcccccccccccccHHHHHHHcccEEEEccccHHHcccccccccEEEEEEcccccccccccEEEEEEEccccccccEEEccccccccEEEcccccccccHHHcccccccccccccccccccEEEEEccccccccEEEEEEEEcccEEEEEEEcccccccHHEEEEcccccccccccccccccccccEEEEEEcccEEEEEcccEEEEccccccccHHHHEEEEEEcccccEEcccccccccccccccEEEEHHccccccccccEEEEEccccccccccccccccccEEEEEEEccccHHHcccccccEEEccEEEEEEEEccccccccccccEEEEEEEccccccccEEEEEccccccccEEEEEcccccccEEEccccccccccccccccccccccccccEEEEcccccccccc 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