[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : pntB
DDBJ      :pntB         NAD(p) transhydrogenase subunit beta
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  466/915 : Eukaryota  137/199 : Viruses  0/175   --->[See Alignment]
c.31.1
:464 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   291->462 1e3tA PDBj 9e-79 79.1 %
:RPS:PDB   298->464 2bruC PDBj 1e-36 59.9 %
:RPS:SCOP  293->464 1d4oA  c.31.1.4 * 5e-31 50.6 %
:HMM:SCOP  291->465 1d4oA_ c.31.1.4 * 1.2e-73 65.1 %
:RPS:PFM   10->464 PF02233 * PNTB e-125 55.4 %
:HMM:PFM   5->464 PF02233 * PNTB 4.3e-205 56.1 458/464  
:BLT:SWISS 1->462 PNTB_RHORU e-146 64.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21397.1 GT:GENE pntB GT:PRODUCT NAD(p) transhydrogenase subunit beta GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 566315..567709 GB:FROM 566315 GB:TO 567709 GB:DIRECTION + GB:GENE pntB GB:PRODUCT NAD(p) transhydrogenase subunit beta GB:PROTEIN_ID AAZ21397.1 GB:DB_XREF GI:71062394 GB:GENE:GENE pntB LENGTH 464 SQ:AASEQ MSANLSAIFYLVSGVLFILALRGLSSPETSRQGNFFGILGMVIAITVTFLSVGSFSSGLIYVLIFLLVGGLIGAFIAYKIPMTAMPELVAGFHSLVGLSAVFVAISAFLNPEAFNLGSPGAIKLASLIEMSIGAAVGAITFSGSIIAFLKLQGIMSGSPITFKGQHFLNALLLFSILVLTYLLCSSQSSNFFWILIAVSFLIGFLLIIPIGGADMPVVISMLNSYSGWAAAGIGFTLENTALIITGALVGSSGAILSYIMCKGMNRSFFNVILGGFGATEQSASTGNKEQRPVKSGNAEDAAFLMKNASSVIIVPGYGMAVAQAQHALREMVDTLKKNDIKVTYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINNDFANADVAFVIGANDVTNPIAKTDPQSPIYGMPVLDVEKCKSVLFVKRSLSPGYAGIDNELFYKDNTLMLFADAKKMTEDITKNL GT:EXON 1|1-464:0| BL:SWS:NREP 1 BL:SWS:REP 1->462|PNTB_RHORU|e-146|64.8|460/464| TM:NTM 9 TM:REGION 3->25| TM:REGION 33->55| TM:REGION 59->81| TM:REGION 88->110| TM:REGION 127->149| TM:REGION 165->187| TM:REGION 196->218| TM:REGION 243->265| TM:REGION 302->324| SEG 58->77|gliyvlifllvggligafia| SEG 200->212|fligflliipigg| BL:PDB:NREP 1 BL:PDB:REP 291->462|1e3tA|9e-79|79.1|172/175| RP:PDB:NREP 1 RP:PDB:REP 298->464|2bruC|1e-36|59.9|167/167| RP:PFM:NREP 1 RP:PFM:REP 10->464|PF02233|e-125|55.4|453/463|PNTB| HM:PFM:NREP 1 HM:PFM:REP 5->464|PF02233|4.3e-205|56.1|458/464|PNTB| GO:PFM:NREP 2 GO:PFM GO:0008746|"GO:NAD(P) transhydrogenase activity"|PF02233|IPR004003| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02233|IPR004003| RP:SCP:NREP 1 RP:SCP:REP 293->464|1d4oA|5e-31|50.6|172/177|c.31.1.4| HM:SCP:REP 291->465|1d4oA_|1.2e-73|65.1|175/177|c.31.1.4|1/1|DHS-like NAD/FAD-binding domain| OP:NHOMO 709 OP:NHOMOORG 605 OP:PATTERN -----------------------------1-------------1------------------------ -1111--------111111-111113111111111111211-1--1--1--1122-------1111111--1111111---11-----------11---------1--1------------------------------------11121111--11111111111-1111111111111111---11---------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------11111-----111111111111111111111111-11111111111-211211521111111111111111111111111111111-111------------1111-11111111----11111-111-211111111111112111111121229421111311-11111121111----111111111111112--1-----2---------------1111-------------------------------1111122-1-11111111111111111111---1111------111111-1111111111-1111111111111111111111111111111111111111111111111111-111111111111----11111111111112111111111-1111111111111111111111111111111111----------11111111111121111-1--111------1-111111--------1-------------------------------------11- 1122111-1------11111111111111211111111111111111111111111111111---------------------------1211111---1-------12-2352214111111162111292-12211111112111111111311123-1412111-11-112--133A---2---121--321---2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 191 STR:RPRED 41.2 SQ:SECSTR #################################################################################################################################################################################################################################################################################ccccEEEEcccccccccccccccccHHHHHHHHHccEEEEEcccHHHHTTTHHHHHHHHHHHHHHccEEEEEEcccccccccTHHHHHHHHTccTTTEEEccccHHHHHHccEEEEcccGGGGcGGGTTcTTcccTTccccccTTccEEEEEcccccccccccccTTTccccEEEEcccHHHHHHHHHHHc DISOP:02AL 1-2, 278-294| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEEccccccccccccccccccccccccHHHHHHHHHHcccEEEEccHHHHHHHHccHHHHHHHHHHHcccEEEEEEEEcccccccHHEEEEEEccccHHHHHHHHHHccHHccccEEEEEcccccccHHHHcccccccccccHHHHHHccEEEEEEccccccccccccccccccccEEEEccHHHHHHHHHHHc //