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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : potA
DDBJ      :potA         spermidine/putrescine transport ATP-binding protein pota
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
b.40.6c.37.1
:362 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   15->346 2yyzA PDBj 2e-78 46.5 %
:RPS:PDB   8->261 3cmvH PDBj 3e-52 12.6 %
:RPS:SCOP  8->244 1b0uA  c.37.1.12 * 2e-55 33.2 %
:RPS:SCOP  243->359 3d31A1  b.40.6.3 * 1e-12 19.5 %
:HMM:SCOP  7->239 1g2912 c.37.1.12 * 2.9e-71 42.7 %
:HMM:SCOP  241->361 1oxsC1 b.40.6.3 * 9.4e-15 30.2 %
:RPS:PFM   48->165 PF00005 * ABC_tran 3e-28 53.8 %
:HMM:PFM   48->166 PF00005 * ABC_tran 5.5e-26 41.2 114/118  
:HMM:PFM   283->359 PF08402 * TOBE_2 1.1e-14 25.3 75/75  
:BLT:SWISS 8->360 POTA_ANASP 7e-79 43.3 %
:PROS 139->153|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22141.1 GT:GENE potA GT:PRODUCT spermidine/putrescine transport ATP-binding protein pota GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1274095..1275183) GB:FROM 1274095 GB:TO 1275183 GB:DIRECTION - GB:GENE potA GB:PRODUCT spermidine/putrescine transport ATP-binding protein pota GB:PROTEIN_ID AAZ22141.1 GB:DB_XREF GI:71063138 GB:GENE:GENE potA LENGTH 362 SQ:AASEQ MTKNKEFVKFDNVDKSYDGKVLVVKGLNLDIEEGEFVTMLGPSGSGKTTCLMMLAGFETPTHGEIYLDGKVISNIPPHKRGIGMVFQNYALFPHMTVYENLAFPLRVRKIPKDEADKKIDKALSMVSLHGFEARMPMQLSGGQQQRVAVARSLVFDPQVVLMDEPLGALDKNLRESMQYEIKHIHESIGVTVVYVTHDQTEALTMSNRIAVFNDGKVQQLSSPDELYEKPVNSFVAEFIGENNKFSGQVLDISGDKCKVKLENGTEILANPVAVKAKGDKTKVSLRPERAIIDPSDKMDNNHKGKIEEIIYHGDHTRLRVDLLGNKDFILKVPNSTARLDLKKGNVLDIGWNSIDCRALDPK GT:EXON 1|1-362:0| BL:SWS:NREP 1 BL:SWS:REP 8->360|POTA_ANASP|7e-79|43.3|344/381| PROS 139->153|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 15->346|2yyzA|2e-78|46.5|329/358| RP:PDB:NREP 1 RP:PDB:REP 8->261|3cmvH|3e-52|12.6|253/1173| RP:PFM:NREP 1 RP:PFM:REP 48->165|PF00005|3e-28|53.8|117/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 48->166|PF00005|5.5e-26|41.2|114/118|ABC_tran| HM:PFM:REP 283->359|PF08402|1.1e-14|25.3|75/75|TOBE_2| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 8->244|1b0uA|2e-55|33.2|235/258|c.37.1.12| RP:SCP:REP 243->359|3d31A1|1e-12|19.5|113/119|b.40.6.3| HM:SCP:REP 7->239|1g2912|2.9e-71|42.7|232/240|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 241->361|1oxsC1|9.4e-15|30.2|106/0|b.40.6.3|1/1|MOP-like| OP:NHOMO 55705 OP:NHOMOORG 1174 OP:PATTERN XXMEUSKMbabWZWeQsLXVSUSc*OSoocjaLEEDGGKJKIGZbWbqQT**j9WiWYaQYOLHd2BB YexS*hjmrrtXeTbYaRQ-QmCCb*RRRRRS*sut****Z*d****izukU***SXlEE***m*z****jhddd*edhR*mtDCEBCRSSO6PFJL--KHYOOOiPbRV9BBBBBBCDEEEEEJVTNVdSPWZeXt****ONM*d*tz*pnpkrVXSKRNRMlkfq***hNVJOMOOUNOJOofjaV*pBai*************************is***lu****y***aqrsqsnmopqqqooeiegi*nci**fShbp**RR**gaRdoqmnquuz*ts****z*yyst**uzzffeddggijfeed*wwjijwuxpt***********l*ow***emnj*wm***luVO**zocglsUdngtvRiffPiaaaPKOKMOgb***dYw****************-***ws*****XD**************LOO**********XWXXXXXX*ejNVqd*887777776679A8CDABBBA999A98B6MFILEG************************v********BO****x*sy******fvvSbMVshKLKKMKJUUVfwog**Xke*qbt*getNhgdaXbmYeijeky*c*NONUHPQPRPJDDFFEFFEFHWHIMSRwu*W*WiNWQ*XYbcYQZiZXXYYZccadd5-EOaSO321444****a************-*************zz*zyz*****oqktuosrssustqrursq*vquwwvzY5************44MJEHEEFOPRPTO*t*hffccZLSWRSZQViRTUVTJXJSY*i********y****r***HGFDEGFEGMlsr*vxwwx*****UVUQQRQPSSFFFFA9RUWVQRQRAA899999*EfEDDEH-FFIFLIFRSNCKPFJJBBCgu*dbz**zxGjS 2244omI-mM9ETgSKFOKIKPOTHVLJJDFFGQKKBLFJIHIGFEJHKRRMaRNNOAGHGH88A7A72794DBA8926869997737-KUAFFHFBBCEB7FRPK6Tru*agaliiQOHHKaPtsB*L**r4xW*NNNFjINpeHRKHGhGG*KfVX*Mn*RyVgI*gk*ggjSJOLJ*ILHMV*x**I**KP*k**Y ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-4| PSIPRED ccccccEEEEEEEEEEEcccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHccEEEEEEcccccccccHHHHHcccHHHccccHHHHHHHHHHHHHHHccHHHHHccHHHHcccHHHHHHHHHHHHccccEEEEEccHHHccHHHHHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHcccccEEEEEEEEccccEEEEEEcccEEEEcccccccccccEEEEEEcccEEEEccccccccEEEEEEEEEEEcccEEEEEEEEccccEEEEEEcccccccccccccEEEEEEcccccEEEccc //