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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ppc
DDBJ      :ppc          phosphoenolpyruvate carboxylase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  481/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
c.1.12
:895 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->895 1jqnA PDBj e-163 39.7 %
:RPS:PDB   484->659 2azoB PDBj 3e-16 13.5 %
:RPS:SCOP  16->895 1fiyA  c.1.12.3 * e-170 38.4 %
:HMM:SCOP  17->895 1jqoA_ c.1.12.3 * 1.7e-264 38.8 %
:RPS:PFM   468->895 PF00311 * PEPcase e-107 45.7 %
:HMM:PFM   447->891 PF00311 * PEPcase 5.7e-81 26.6 394/503  
:BLT:SWISS 16->895 CAPP_ACIAD e-179 40.9 %
:PROS 551->563|PS00393|PEPCASE_2
:PROS 150->161|PS00781|PEPCASE_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21598.1 GT:GENE ppc GT:PRODUCT phosphoenolpyruvate carboxylase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 756745..759432 GB:FROM 756745 GB:TO 759432 GB:DIRECTION + GB:GENE ppc GB:PRODUCT phosphoenolpyruvate carboxylase GB:PROTEIN_ID AAZ21598.1 GB:DB_XREF GI:71062595 GB:GENE:GENE ppc LENGTH 895 SQ:AASEQ MIKRDLYYERIPTKSLREDVRYLGDVLGRVIKKQEGQSFFKLVEDTRLLSKANLANKHVKDPFKNILNKIKNLNPENTFKLARAFNHFMNFINLSETTDASRKLDEYENNKKNSNKNIFIEEIFEKLFKDKKITNKKIYDVAKKLNIGIVLTAHPTEVKRRTLIQKYNKIIKILEQRDLYKKNLSKLKTLDKDLYNEITIIWNTDELKRSKPTPSEEARWGLAVIEDSLWDSIPKVYRRLNNIFLKNMGKSLPRNFNPIEFGSWMGGDRDGNPNVTAKVTSEALLLSRWEAAKLYEKQLTNLIRSLSMKKCSTQILNITGKTFEPYRVFLRPLRDKLRATHILIKEHLVNKEPLDHKKLLSNTGEILTPLRVVRDSLIQNQSENIAEGDLLDLIRRARCFGINLAKLDIRQESSRHTKLISEIVKKKYNKDYFLWNESEKLAFLSSRIKSKKNLIKNSLLKNKENKEVWSTFNVLVDQPKECLGAYVISMTSAASDILSVAYLQKEAKIVNKLRVVPLFETLDDLRNAKSIMNSLFSLPWYRKSINYKQEIMIGYSDSSKDAGKLSASWHQYKLQDEILKLAKKYKIDITFFHGRGGSAGRGGGPIQATLKSQPANSVNGKIRITDQGEVIQQKYGYEPLAKYNLCSYIGAVVQATLNPPPEPKIKWKQLIEKMSEISMKSYRSNINEKSDFIRYFRTVTPHKALGKLSIGSRPSKRKNVDNIQSLRAIPWVFAWTQIRLFLPAWLGTTEALNYASSKVFKKILVDMEKNWPFFNSTMDILDMVISKVDPEISKVYENQLADKKLKIVGKKLRSQFETLKRLNKVITPFQIRKQRKVFRTSVIIRNIYSEVLHITQSIVMKKLTLKKLNKNKKQHLADALMTSIAGISAAMKNTG GT:EXON 1|1-895:0| BL:SWS:NREP 1 BL:SWS:REP 16->895|CAPP_ACIAD|e-179|40.9|873/894| PROS 551->563|PS00393|PEPCASE_2|PDOC00330| PROS 150->161|PS00781|PEPCASE_1|PDOC00330| SEG 64->74|knilnkiknln| SEG 108->133|ennkknsnknifieeifeklfkdkki| SEG 444->467|lssrikskknliknsllknkenke| SEG 594->604|grggsagrggg| SEG 861->873|kkltlkklnknkk| BL:PDB:NREP 1 BL:PDB:REP 15->895|1jqnA|e-163|39.7|862/874| RP:PDB:NREP 1 RP:PDB:REP 484->659|2azoB|3e-16|13.5|156/227| RP:PFM:NREP 1 RP:PFM:REP 468->895|PF00311|e-107|45.7|420/489|PEPcase| HM:PFM:NREP 1 HM:PFM:REP 447->891|PF00311|5.7e-81|26.6|394/503|PEPcase| GO:PFM:NREP 2 GO:PFM GO:0006099|"GO:tricarboxylic acid cycle"|PF00311|IPR001449| GO:PFM GO:0008964|"GO:phosphoenolpyruvate carboxylase activity"|PF00311|IPR001449| RP:SCP:NREP 1 RP:SCP:REP 16->895|1fiyA|e-170|38.4|865/874|c.1.12.3| HM:SCP:REP 17->895|1jqoA_|1.7e-264|38.8|878/0|c.1.12.3|1/1|Phosphoenolpyruvate/pyruvate domain| OP:NHOMO 595 OP:NHOMOORG 517 OP:PATTERN ------------------------1--1111------------------------------------- 11-111111111---11----11111-----11111111111-1111--11-111-----11-----111111111111-1------------------1-1-1111111---------------11-111-111-22222---21111111111111111111111111111111111111111111---1----------------------------------------1---------------------1-1--1-112---------------11111111111111111111111111111111111111111111-------------------------------------------------11-11112-----1211111111111------------11111111---------1------11----------1-1------------1-1------------------------------1--111111111111111111111121111111111111--111121111111111111--11111111111111111-1------------111-1---1----11--------------1--------1---11111111--1111111111111111111111---1111------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111---------1111-1111111-11-11111111111111111111111111111111111111--------1111111111111111111111111---------1---------------------------------1----------------1-- 111111--1-----1--------------------------------------------------------------------------------------------12------------------------------------------------------1-----------1321M1112285D9-54221---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 867 STR:RPRED 96.9 SQ:SECSTR ##############HHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTcHHHHH##HHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTT######cTTcTHHHHHHHHHHHTcTTccHHHHHHHHHTccEEEEEcccTTcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTcccccTTcccEEEEEcTTTccTTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcTcccHHHHHHHHHHHHHHHHHHHHHHHHTTccccccccccccHHHHHHHHHHHHHHHHHTTcHHHHTTHHHHHHHHHHHTTTTccEEEEEEEHHHHHHHHHHHHHHHTcccGGGccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccTTcEHTTcccccccccEETTTTEEEEEEEEcTTccEcccccccccccTTcTTTTTTTcEEEEEEEcccGGGccccEcccHHHHHHHHHHHHHHHHHHHTTccTTHHTcEccccccccEGGGccHHHHHHHHHEEEEccccTTccEEEEcTTccEEEEcccEEEEEcHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHccHHHHHHcccccccc######cGGGccHHHHHHHHHHTTccGGGTTTHHHHHHHHHTTTcHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHHccTTTHHHHHHHHHHHHHHHHHHHHTTcccTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHcccc DISOP:02AL 1-2, 4-7, 52-64, 104-118, 710-726, 864-875| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccEEHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHcHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHcccHHHcccEEEEEHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccc //