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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : prpC
DDBJ      :prpC         citrate (si)-synthase
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  713/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
a.103.1
:374 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->368 1a59A PDBj e-104 53.9 %
:RPS:PDB   5->368 2c6xA PDBj e-111 34.5 %
:RPS:SCOP  5->368 1a59A  a.103.1.1 * e-115 51.9 %
:HMM:SCOP  5->375 1aj8A_ a.103.1.1 * 4.3e-137 42.8 %
:RPS:PFM   11->356 PF00285 * Citrate_synt 1e-72 41.0 %
:HMM:PFM   8->356 PF00285 * Citrate_synt 2.6e-134 46.4 349/356  
:BLT:SWISS 5->368 CISY_ABDS2 e-103 53.9 %
:PROS 257->269|PS00480|CITRATE_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21959.1 GT:GENE prpC GT:PRODUCT citrate (si)-synthase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1110855..1111979 GB:FROM 1110855 GB:TO 1111979 GB:DIRECTION + GB:GENE prpC GB:PRODUCT citrate (si)-synthase GB:PROTEIN_ID AAZ21959.1 GB:DB_XREF GI:71062956 GB:GENE:GENE prpC LENGTH 374 SQ:AASEQ MSDDIKKGLLGIVVDETEISKVMPEINSLTYRGYAAQDLCARCDFEEVAYLILNKELPNKKQLKEFKKELSKEITLSKNLLSILKKIPKNSHPMDVARTAVSVMGLEDKETKDSSPKANLRKAIRILAKTPTALAAFYRLRKGKKIIAPKKNLTFSGNFFHMCFGKVPEKEIVKAFDVSLILYAEHSFNVSTFTARTITSSLSDIHGAITGAIASLKGPLHGGANEEVMHMMKKIKKPENALKWITKALKNKDVVMGFGHRVYKSGDSRVPTMREYFKRVAIIKKDKTFEKIYDIVEKVMIKEKNIYPNVDYPTGPTYHLMGFDTDFFTPIFVISRITGWSAHIMEQHAANKLIRPLASYKGSKHRKVIQLNQR GT:EXON 1|1-374:0| BL:SWS:NREP 1 BL:SWS:REP 5->368|CISY_ABDS2|e-103|53.9|362/379| PROS 257->269|PS00480|CITRATE_SYNTHASE|PDOC00422| SEG 76->91|lsknllsilkkipkns| BL:PDB:NREP 1 BL:PDB:REP 5->368|1a59A|e-104|53.9|362/377| RP:PDB:NREP 1 RP:PDB:REP 5->368|2c6xA|e-111|34.5|359/363| RP:PFM:NREP 1 RP:PFM:REP 11->356|PF00285|1e-72|41.0|344/347|Citrate_synt| HM:PFM:NREP 1 HM:PFM:REP 8->356|PF00285|2.6e-134|46.4|349/356|Citrate_synt| GO:PFM:NREP 2 GO:PFM GO:0044262|"GO:cellular carbohydrate metabolic process"|PF00285|IPR002020| GO:PFM GO:0046912|"GO:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer"|PF00285|IPR002020| RP:SCP:NREP 1 RP:SCP:REP 5->368|1a59A|e-115|51.9|364/377|a.103.1.1| HM:SCP:REP 5->375|1aj8A_|4.3e-137|42.8|367/371|a.103.1.1|1/1|Citrate synthase| OP:NHOMO 1591 OP:NHOMOORG 932 OP:PATTERN 11----2111111112-1222111111112111-2---------------111--1-----221--11 1131221233321232333-32113333333322222353232223211221322223--222222343411111111-1113112221111-1-----11111111111--------------11111111111111111---32211111111111111111111111111111111111111111---21322222222222222232332322211112111111112211111111111111111111-----------------------1-1-------111------------------------111111111----------------1-111---1-11-132--111------1------11-1222311111113331122211111111111112-11111112233134411212231111131112111111122222222211111221111111111--11111111111111111111211222222222222222222642222-222635321133211122321123224112122222222211211121322-1--21----222121211111123-22111111111-12111111111--111221221222232222222222222222222---2222------21111112222222222-2212222222222221222222222312222222222222222111111111-111111111111--1222222222212222-----1-----11112221222222212222222222222222211111111111113222222222222222222221111111-222222-------------------------------------1---1-111111 11--44--521-44423222333444422222221222221222122322333312222222211221-1321113333321111111-22333331111221121-2-3212111--111121211111E2-112-1113111111111111-1--111-111111313711214143f2221243332641111-12 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 373 STR:RPRED 99.7 SQ:SECSTR #cHHccGGGTTccccccccEEEETTTTEEEETTEEHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHTcccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHHTTcccccccTTcccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHTTTccHHHHHHHHHHHHHcTTcccccHHHHHHHHTccccTTHHHHHHHHHHTTcccTTccccccccccHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHcccccccccTHHHHHHHHHHTTccGGGHHHHHHHHHHHHHHHHHHHHTTTccccccccccccccccccccGGGc DISOP:02AL 1-2, 373-374| PSIPRED cccccccccccccEEEEEEEEEEccccEEEEccccHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc //