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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : prpE
DDBJ      :prpE         hypothetical protein
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  712/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:631 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->623 2p20A PDBj e-117 37.2 %
:RPS:PDB   7->81 3da5A PDBj 7e-14 15.1 %
:RPS:PDB   54->600 3cw9A PDBj 3e-73 21.2 %
:RPS:SCOP  1->603 1pg3A  e.23.1.1 * 3e-83 34.5 %
:HMM:SCOP  5->626 1pg4A_ e.23.1.1 * 2.5e-167 31.6 %
:RPS:PFM   5->77 PF11930 * DUF3448 3e-19 49.3 %
:RPS:PFM   88->526 PF00501 * AMP-binding 7e-49 36.5 %
:HMM:PFM   88->527 PF00501 * AMP-binding 4.6e-102 31.1 411/418  
:HMM:PFM   3->78 PF11930 * DUF3448 1.9e-29 46.7 75/82  
:BLT:SWISS 12->624 ACSS3_PONAB 0.0 52.0 %
:PROS 238->249|PS00455|AMP_BINDING

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21445.1 GT:GENE prpE GT:PRODUCT hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(612190..614085) GB:FROM 612190 GB:TO 614085 GB:DIRECTION - GB:GENE prpE GB:PRODUCT hypothetical protein GB:NOTE similar to COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases GB:PROTEIN_ID AAZ21445.1 GB:DB_XREF GI:71062442 GB:GENE:GENE prpE LENGTH 631 SQ:AASEQ MNKKFSEIYQNSIKNPEDFWQEVSNDIFWFKKPTKILNKSNPPFYKWFEDGVTNTCYNALDLHIDEGRGEKLALIYDSPITGNKKQFTYKELKEKVSKFAGALKNQGVNKGDRVIIYMPMIPEAVIAMLACGRIGAIHSVVFGGFASSELASRIDDSKAKILVTASCGFEPGRTVEYKPLVEEAIKMASHKIEKLILFQRSGNEANINAPREISWDEALSNAKEVDCVEMNSNDLAYILYTSGTTGVPKGIVRDIGGHIVALKWTMKNIYNIDTDDVWWSASDIGWIVGHSYIVYAPLFKGCTTVLFEGKPVGTPDAGAFWKIISDYKVKSLFTAPTAFRAIKKEDPEGKFFSKYDLSKFESLFLAGERADPDTIKWAENLLKVPVIDHWWQTETSWAISSNCTGIEMMKTKYGSACKAVPGYDVQIMKPDQTLAKPNEMGDIVIKLPLPPGTFPTLWNADKRYKDNYMTNYDGYYETYDAGHIDEDGYIWIMSRTDDIINVAGHRLSTGAIEEVLSEHQSVAECAVLGVADKLKGQLPIGLVVLKSGVEKDHATISKECIQMVRDKIGPVAAFKIVIVIKRLPKTRSGKILRGTIRKIADGEDYKMPATIDDPAILTEIKEDLMKNSILK GT:EXON 1|1-631:0| BL:SWS:NREP 1 BL:SWS:REP 12->624|ACSS3_PONAB|0.0|52.0|613/686| PROS 238->249|PS00455|AMP_BINDING|PDOC00427| BL:PDB:NREP 1 BL:PDB:REP 3->623|2p20A|e-117|37.2|613/641| RP:PDB:NREP 2 RP:PDB:REP 7->81|3da5A|7e-14|15.1|73/121| RP:PDB:REP 54->600|3cw9A|3e-73|21.2|500/503| RP:PFM:NREP 2 RP:PFM:REP 5->77|PF11930|3e-19|49.3|73/85|DUF3448| RP:PFM:REP 88->526|PF00501|7e-49|36.5|392/405|AMP-binding| HM:PFM:NREP 2 HM:PFM:REP 88->527|PF00501|4.6e-102|31.1|411/418|AMP-binding| HM:PFM:REP 3->78|PF11930|1.9e-29|46.7|75/82|DUF3448| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 1->603|1pg3A|3e-83|34.5|597/634|e.23.1.1| HM:SCP:REP 5->626|1pg4A_|2.5e-167|31.6|614/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 7106 OP:NHOMOORG 961 OP:PATTERN 54-2--9GFDFFFEGD2175753GA55322783251--333317676954232----1---555---2 1366H433112625JRGBB-AV44OVBBBBBBUSVSOg*p3D6L3113154-A3B885--95A29FNIDA51-------377I223321112-2--1--31311252432--------------133333223554BAAEF222A82252444--111113111115459111122111122256466--1DAIEEFEFFDF9ECGFIC68BBCEEFHBKECB44222222H3144454444444444422441-1-11-2----12211-1-123211-------------------------------------------11---21111211-1-9-33------4--81151A61261--B41111---522A88E1111144TMO637QITMK35553354547-889A9F988EI-766567897B88AF765BAA5866A9D33333333B3212A94-----------1------1-----1----2ACQA-5HG8EEGHIHD97887EDGLBBBB7CNAVTfjT35GF97C998MAIHOJ3391121851122212222E984cMD5575366554-3643522553353C689222-1222211111-11-111222411441674654645555547755557475598--12773------43745126666666665-5666666666666665665435247837556676777556566524344541-222222222222---411121546425A34111-21-111-1112888984899962DBEDAC8BACDEA633432222323222446666665645544333333332222--2-222222--------1-------------------------------------21- 1111VU4-A51-67BIIFBBEB9EFEFCC78788A7DEAFCFDABBB6AA8AED88B37B8A52233232432223333332222212-BG8IB8D6543557HHF1788PCE8A9C94565B7NH6K7W*F1IFL9887C76A767765C64H8EB9DDDK9UBKHJANP9DPD2346Y53485LJKpAVM34HBDB7 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 625 STR:RPRED 99.0 SQ:SECSTR #cEETTccGGGccEcTTccTTTcHHHHTTccTTcTTcEEccccccccccccHHccHHHHHHHHHHHccTTcEEEEEGETccGGTEEEEHHHHHHHHHHHHHHHHHTTccTTcEEEEEccccHHHHHHHHHHHHHTcEEEEEcTTccHHHHHHHHHHTTccEEEEccGGHHHHHHHcHHHHHHHHHTTcccEEEEHHEcccccccTTcEEHHHEETTEEcccccccccccccTTcEEEEEEEcccccccEEEEEEGGGHHHHHHHHHTccccccTTcEEEEcccTTcHHHHHTTHHHHHHTTcEEEEccHHHHccccHHHHHHHHHHHTccEEEEcHHHHHHHHHHHHHTcTcTTcccTTccEEEEccccccHHHHHHHHHHcccEEEEEEEETTTEEEEEEEEEEEccccccEEcccTTccEEEEcTTccTTccccTTccEEEEEEccccTTcccccTTcHHcHHHHHHHEETTEEEEEEEEEEcTTccEEEEEEccccEEETTEEEcHHHHHHHHTTcTTEEEEEEEEEEETTTEEEEEEEEEEcTTcccccccHHHHHHHHHHccccGGGcccEEEEcccccccTTccccHHHHHHHHHHHcccEEEEEEEEETTEEEEEEEEE##### DISOP:02AL 629-631| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccccEEccccEEHHHHHHHHHHHHccccccEEEEEEcccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHccccEEEcHHHHHHHHHHcccccccHHHccccEEEEEEEccccccHHHHHHHHHHccccEEEccccHHHcccEEEcccccccccccccEEccccccEEEEEEcccccccccccEEEEEEEccccccccccccccHHHHHHHHHHccccEEEEccEEEEccccEEEEEEcEEEEEEcccEEEcHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccc //