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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : purF
DDBJ      :purF         amidophosphoribosyltransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  854/915 : Eukaryota  183/199 : Viruses  2/175   --->[See Alignment]
c.61.1d.153.1
:493 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->471 1gph1 PDBj e-109 45.4 %
:RPS:PDB   23->484 1ecbC PDBj 3e-82 38.0 %
:RPS:SCOP  23->248 1ao0A2  d.153.1.1 * 5e-70 43.4 %
:RPS:SCOP  258->475 1ao0A1  c.61.1.1 * 8e-79 47.5 %
:HMM:SCOP  23->264 1ecfA2 d.153.1.1 * 7.8e-77 38.4 %
:HMM:SCOP  257->488 1gph11 c.61.1.1 * 3e-75 42.4 %
:RPS:PFM   90->216 PF00310 * GATase_2 1e-08 37.4 %
:HMM:PFM   23->66 PF00310 * GATase_2 6.8e-06 32.6 43/362  
:HMM:PFM   86->216 PF00310 * GATase_2 1.4e-16 26.0 123/362  
:HMM:PFM   287->393 PF00156 * Pribosyltran 8.6e-16 31.1 103/125  
:BLT:SWISS 21->489 PUR1_RHIET e-132 50.7 %
:PROS 363->375|PS00103|PUR_PYR_PR_TRANSFER
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21518.1 GT:GENE purF GT:PRODUCT amidophosphoribosyltransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(682918..684399) GB:FROM 682918 GB:TO 684399 GB:DIRECTION - GB:GENE purF GB:PRODUCT amidophosphoribosyltransferase GB:PROTEIN_ID AAZ21518.1 GB:DB_XREF GI:71062515 GB:GENE:GENE purF LENGTH 493 SQ:AASEQ MKKTIKIPKKKFKIYNPKLKEECGVFGVSNNKDSAALTALGLHALQHRGQEGCGIVTFDGKKYYSEKRFGLVGDNFNKEKVLNSLPGDYAIGHNRYSTTGENTLRNIQPFFADTNAGGIGVAHNGNLTNSITLRNRLVQDGAIFHTTSDTETIVQLIAKSKRNKTIDKVIDAIFQIQGGYALVMLTQNTLIGVRDPHGIRPLVIGKIKDSYVFASETCALDIIGAKYIRDVENGEVVYIENNELKSIKPFPARKVRPCVFEYIYFARPDSLLNGKSAYEHRKQFGIELAKENKIKADIVVPVPDSGNAAALGFAQHLGINFELGLIRNHYVGRTFIEPSQKIRSLGVKLKLNANQSTIKDKIIILIDDSLVRGTTSHKIVKMLYDAGAKEVHVKIACPEIRFPDFYGVDTPTKKELLAANKTNDEICEYIGAKSLDFLSLEGVYRAMGFNKRDNNYPQLTDHYFTGEYPVKPIDELGDDKITQLSLLSTASNN GT:EXON 1|1-493:0| BL:SWS:NREP 1 BL:SWS:REP 21->489|PUR1_RHIET|e-132|50.7|469/498| PROS 363->375|PS00103|PUR_PYR_PR_TRANSFER|PDOC00096| SEG 2->20|kktikipkkkfkiynpklk| SEG 358->368|ikdkiiilidd| BL:PDB:NREP 1 BL:PDB:REP 23->471|1gph1|e-109|45.4|447/465| RP:PDB:NREP 1 RP:PDB:REP 23->484|1ecbC|3e-82|38.0|458/482| RP:PFM:NREP 1 RP:PFM:REP 90->216|PF00310|1e-08|37.4|123/175|GATase_2| HM:PFM:NREP 3 HM:PFM:REP 23->66|PF00310|6.8e-06|32.6|43/362|GATase_2| HM:PFM:REP 86->216|PF00310|1.4e-16|26.0|123/362|GATase_2| HM:PFM:REP 287->393|PF00156|8.6e-16|31.1|103/125|Pribosyltran| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00310|IPR000583| RP:SCP:NREP 2 RP:SCP:REP 23->248|1ao0A2|5e-70|43.4|221/230|d.153.1.1| RP:SCP:REP 258->475|1ao0A1|8e-79|47.5|217/225|c.61.1.1| HM:SCP:REP 23->264|1ecfA2|7.8e-77|38.4|232/0|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 257->488|1gph11|3e-75|42.4|231/0|c.61.1.1|1/1|PRTase-like| OP:NHOMO 2109 OP:NHOMOORG 1106 OP:PATTERN 11242133444444431333333122232313343212222222232222222332233131111-22 2221121111112132222-21222322222222221222211112121111223221221232122333211111112233322232112221--1--2112112222111111111111111122222322223222222222222122222222222222222221222221222221222222222322211111111111111121222211122212112212123221111111111111112222221222221212222222221212222222222222222222222222212222222222222222222222222333333323222222222322222212222222122222222222221222222222223332222223222222222222-22222122252233333334445422212222232222222222222222222122211111111---------------222232222222222545555222225533333313552223222222222222222212221323222222222222222221222222222222222332232222232232222222222212111111122222222222222222222222222222222222222-2122311-11122222222222222222-22122222222222222222222222222222222222222222222222222222222222222--222222212221222222222112221222222212232222222222223323222333222222222322222222222222112111122222222222222222--------1---------------------------2122212121231 1111221-1---11211221111111111111111112221221111121111111111111111111111111111-1111111111-12112121111111211-24-3212141111111111131251-1-111111-12211111111111211---211-1312111122-11Z2221122222332542221 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 472 STR:RPRED 95.7 SQ:SECSTR ####################cccEEEEEEcccccHHHHHHHHHHHGGGcccEEEEEEEcTTccEEEEEEccHHHHccHHHGHHHccccEEEEEEEcccccccTTcccccEEEcccTccEEEEEEEEETTHHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHccEEEEEEEEETTEEEEEEcTTcccccEEEEEEEEEEEEccTHHHHHHTcEEEEEccTTEEEEETTccEEEEEccccccccccHHHHHTTccTTcccccccHHHHHHHHHHHHHHHTTccccEEEEcTTTTHHHHHHHHHHHTccccccEEEcccccccccccccccccccGGGTEEEcGGGTTTccEEEEEccccccHHHHHHHHHHHHTTcccEEEEEcccccccccccccccccGGGcTTTTccHHHHHHHHTccEEEEccHHHHHHHHTTHTTcTTccccccHHHHcccccHHHHHHHHHHHTTcHcHccEEE# DISOP:02AL 1-14, 333-348, 486-493| PSIPRED ccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEEccEEEEEEccccccHHHHHHHHHHcccccEEEEEEEEEEcccccccccccEEEEccccEEEEEEEEEEccHHHHHHHHHHcccEEccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccEEEEEEEcccEEEEEEcccccEEEEEEcccEEEEEEccHHcccccccEEEEcccccEEEEEcccEEEEEcccccccccEEEEEEEcccccHHHHcccHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHcccHHHccEEEccccccEEEcccHHHHHHHHHHHHcccHHHHcccEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHccccHHHHHHHHcccEEEEEcHHHHHHHHccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcc //