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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ruvC
DDBJ      :ruvC         crossover junction endodeoxyribonuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  3/915 : Eukaryota  3/199 : Viruses  1/175   --->[See Alignment]
c.55.3
:164 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->165 1hjrA_ c.55.3.6 * 3.7e-11 24.4 %
:HMM:PFM   102->160 PF04572 * Gb3_synth 0.00016 22.0 59/135  
:HMM:PFM   2->25 PF04312 * DUF460 0.001 50.0 24/138  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21414.1 GT:GENE ruvC GT:PRODUCT crossover junction endodeoxyribonuclease GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 579588..580082 GB:FROM 579588 GB:TO 580082 GB:DIRECTION + GB:GENE ruvC GB:PRODUCT crossover junction endodeoxyribonuclease GB:PROTEIN_ID AAZ21414.1 GB:DB_XREF GI:71062411 GB:GENE:GENE ruvC LENGTH 164 SQ:AASEQ MLIIGIDPGITGSICFFQDGKITDVIEMPNMPEGKKNKKQVNGAQIYYEISSRIKDIKKEDIKVIIEQVSAMPGQGVTSMFNFGQSFGILKGICSAMQLPMYFVRPTKWKKYFNLINSEKDASRTKAIEVFPYFSSELSRKKDSNKADAILIASFYYETYKLEE GT:EXON 1|1-164:0| SEG 54->67|ikdikkedikviie| HM:PFM:NREP 2 HM:PFM:REP 102->160|PF04572|0.00016|22.0|59/135|Gb3_synth| HM:PFM:REP 2->25|PF04312|0.001|50.0|24/138|DUF460| HM:SCP:REP 1->165|1hjrA_|3.7e-11|24.4|156/158|c.55.3.6|1/1|Ribonuclease H-like| OP:NHOMO 7 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1----1-------- --------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------- DISOP:02AL 163-164| PSIPRED cEEEEEcccccEEEEEEEccccEEEEEcccEEEHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccc //