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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : salY
DDBJ      :salY         hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  42/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.39.1
:286 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  41->149 1s7bA_ f.39.1.1 * 4.1e-07 12.4 %
:HMM:SCOP  180->287 1s7bA_ f.39.1.1 * 3.5e-06 22.9 %
:HMM:PFM   30->142 PF00892 * EamA 3.8e-11 18.0 111/126  
:HMM:PFM   188->277 PF00892 * EamA 7.8e-10 16.7 90/126  
:HMM:PFM   154->219 PF03647 * Tmemb_14 7.9e-05 18.2 66/96  
:BLT:SWISS 25->277 Y1552_ARCFU 1e-08 25.8 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21515.1 GT:GENE salY GT:PRODUCT hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(679765..680625) GB:FROM 679765 GB:TO 680625 GB:DIRECTION - GB:GENE salY GB:PRODUCT hypothetical protein GB:NOTE similar to COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily GB:PROTEIN_ID AAZ21515.1 GB:DB_XREF GI:71062512 GB:GENE:GENE salY LENGTH 286 SQ:AASEQ MNKLSDQQKGSLLAFVAVMFITPDSLFIRLSNVDTWGLVFYRGLIPFITVFLGMLLIYKLNFFKMLFSSGYHGLLYIGTFSVTNITFVVSIQNTNVANTLVMIAMAPMLSAVLGAIFLKELPDRKTWITIFVTFTAAIYIFYDSIQLGNFFGDILGLITALGLAVGAVTIRSAKDKNLIPAAVVGKLIVAMFALLFIESFALVDSDLIIVPLMCVMCVAIPFVLVTIAPRFIPAAEVNLFFLLETIIGPIWVWLIIKEQPSLETIQGGAVIITAIAIHSFIKLRNS GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 25->277|Y1552_ARCFU|1e-08|25.8|240/270| TM:NTM 10 TM:REGION 11->33| TM:REGION 42->64| TM:REGION 73->95| TM:REGION 100->122| TM:REGION 126->148| TM:REGION 150->172| TM:REGION 177->199| TM:REGION 206->228| TM:REGION 237->259| TM:REGION 261->282| HM:PFM:NREP 3 HM:PFM:REP 30->142|PF00892|3.8e-11|18.0|111/126|EamA| HM:PFM:REP 188->277|PF00892|7.8e-10|16.7|90/126|EamA| HM:PFM:REP 154->219|PF03647|7.9e-05|18.2|66/96|Tmemb_14| HM:SCP:REP 41->149|1s7bA_|4.1e-07|12.4|105/106|f.39.1.1|1/2|Multidrug resistance efflux transporter EmrE| HM:SCP:REP 180->287|1s7bA_|3.5e-06|22.9|105/106|f.39.1.1|2/2|Multidrug resistance efflux transporter EmrE| OP:NHOMO 52 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------1-----------1-----------------------------------------------------1-----1----------1-----------------------------------------------------------------------------------------------------------1------------------------------------1-------1----------------1-1-----------------------------2--311-22122111------1-----1-1---------------------------------------------3-------------------------------------------11------11---1-----------------------1-----1-----------------------------------------------------11--11---------------1-------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-10| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcc //