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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : serA
DDBJ      :serA         phosphoglycerate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  744/915 : Eukaryota  181/199 : Viruses  1/175   --->[See Alignment]
c.2.1c.23.12c.91.1
:316 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->296 3gg9C PDBj 3e-41 32.0 %
:RPS:PDB   3->313 3ba1A PDBj 2e-53 24.3 %
:RPS:SCOP  47->313 1aq2A1  c.91.1.1 * 2e-43 12.4 %
:HMM:SCOP  1->140 1dxyA2 c.23.12.1 * 5.3e-27 34.4 %
:HMM:SCOP  105->286 2nacA1 c.2.1.4 * 4.6e-53 44.0 %
:RPS:PFM   114->284 PF02826 * 2-Hacid_dh_C 2e-28 39.8 %
:HMM:PFM   113->285 PF02826 * 2-Hacid_dh_C 1e-53 44.5 173/178  
:BLT:SWISS 20->316 DHGY_METEA 9e-30 31.5 %
:PROS 224->240|PS00671|D_2_HYDROXYACID_DH_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22169.1 GT:GENE serA GT:PRODUCT phosphoglycerate dehydrogenase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1298690..1299640) GB:FROM 1298690 GB:TO 1299640 GB:DIRECTION - GB:GENE serA GB:PRODUCT phosphoglycerate dehydrogenase GB:PROTEIN_ID AAZ22169.1 GB:DB_XREF GI:71063166 GB:GENE:GENE serA LENGTH 316 SQ:AASEQ MLKVAILDDYQNVSHEFVDLKKLSGKYEFKIFSKPFEDEADAIEQLSDFEALLIMRERTPITKNLIDNLNDLKYIITSGSRNKAIDLAAAKKRKITVCGTDIDFAGTTELTWGLILGLARNFKEEIDNMYQGYWQTTIGFELKGKILGLVGLGRVGSQVAKIAKAFGMEVMAWSENLNLDTCKELGVLPCSKEDLFQNSDFLSIHVQGGERYKELIKLKELDSMKKTAFLINTSRGSIINEDDLIIALSTNVIAGAGLDVYEKEPLPEGNKLRFLPNALLMPHVGYVTAENYSIFYTQMIEGLEACVAGKPLRVLE GT:EXON 1|1-316:0| BL:SWS:NREP 1 BL:SWS:REP 20->316|DHGY_METEA|9e-30|31.5|286/314| PROS 224->240|PS00671|D_2_HYDROXYACID_DH_3|PDOC00063| SEG 142->156|lkgkilglvglgrvg| BL:PDB:NREP 1 BL:PDB:REP 2->296|3gg9C|3e-41|32.0|294/340| RP:PDB:NREP 1 RP:PDB:REP 3->313|3ba1A|2e-53|24.3|301/312| RP:PFM:NREP 1 RP:PFM:REP 114->284|PF02826|2e-28|39.8|171/176|2-Hacid_dh_C| HM:PFM:NREP 1 HM:PFM:REP 113->285|PF02826|1e-53|44.5|173/178|2-Hacid_dh_C| GO:PFM:NREP 2 GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF02826|IPR006140| GO:PFM GO:0048037|"GO:cofactor binding"|PF02826|IPR006140| RP:SCP:NREP 1 RP:SCP:REP 47->313|1aq2A1|2e-43|12.4|259/310|c.91.1.1| HM:SCP:REP 1->140|1dxyA2|5.3e-27|34.4|128/0|c.23.12.1|1/1|Formate/glycerate dehydrogenase catalytic domain-like| HM:SCP:REP 105->286|2nacA1|4.6e-53|44.0|182/0|c.2.1.4|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 3511 OP:NHOMOORG 993 OP:PATTERN 22211131111111113212211242212331111111222212121112221233333332221-22 2371422233311334411-131146111114322223871212311-1122672221--3132246365132223331-2-32233333331333---13423444614-----------------121---11-333441112323123322211111111221132321111111111122122244222322222222222222233543322223337-1111112232666666466666665443331243333111333324-21375111222-------------------------------1---------3514744444442422355311143-113124156111132128842-232144334-1--156CBA3225977544444443445-3463365AA55-79933277769A9743133456676262222222232221332-----------------------------223223465487888752444466B8666655A5A59761456243464549497541-2--12--111114421213332---2311222223233234622322324212222222222222222222123222555331322222222223222223224232--12121------43332332334254534-33245443443544424444A6343123333333333333333644233332-444444444444--12-----232112245222333-3323322222322252226245555898465773555111112111211123333333443--222222231111--13222222--------11------------------1-------3232223222222 ----372-21--13289776676B9A778455566639789896776567BEGF88B67777E2322212233333313225544322-8B49473AAA7515555-3549A9A9A411-12415A-A39S7-667122-93253-2-1-5--53B56945514733D58422952452H23237A7EH6873399EB1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 316 STR:RPRED 100.0 SQ:SECSTR ccEEEEcccccHHHcHHHHHHHHHHHcEEEEGGGcccHHHHHHHHTTTEEEEEETcccccccHHHHHHcTTccEEEEcccccTTccHHHHHHHTcEEEccccTTHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGccccccTTccEEEEcccHHHHHHHHHHHTTTccEEEEcccccTTcccEEEcEcccHHHHHHTccEEEEcccccGGGTTcccHHHHHHHcTTcEEEEcccGGGccHHHHHHHHHHTcccEEEEcccTTTTcccHGGGGGcTTEEEccccTTccHHHHHHHHHHHHHHHHHHHHTccccTHT DISOP:02AL 315-316| PSIPRED cEEEEEEcccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHccccEEEEEcccccccHHHHHHccccEEEEEEccccccccHHHHHHcccEEEEccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccccccEEEEEEccHHHHHHHHHHHHcccEEEEEccccccccHHHcccEEccHHHHHHHccEEEEEccccHHHHccccHHHHHHccccEEEEEccccccccHHHHHHHHHcccEEEEEEEcccccccccccHHHHcccEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccc //