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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ssdH
DDBJ      :ssdH         Aldehyde dehydrogenase family
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  798/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.82.1
:458 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   37->458 1bxsA PDBj 1e-50 31.2 %
:RPS:PDB   33->455 3ed6A PDBj 5e-86 26.5 %
:RPS:SCOP  23->458 1ad3A  c.82.1.1 * 1e-85 23.8 %
:HMM:SCOP  1->455 1uzbA_ c.82.1.1 * 5.5e-114 33.8 %
:RPS:PFM   21->435 PF00171 * Aldedh 2e-65 33.9 %
:HMM:PFM   17->451 PF00171 * Aldedh 3.8e-119 32.9 434/462  
:BLT:SWISS 37->455 ALDH_CLAHE 2e-54 33.3 %
:PROS 253->264|PS00070|ALDEHYDE_DEHYDR_CYS
:PROS 225->232|PS00687|ALDEHYDE_DEHYDR_GLU

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22092.1 GT:GENE ssdH GT:PRODUCT Aldehyde dehydrogenase family GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 1222669..1224045 GB:FROM 1222669 GB:TO 1224045 GB:DIRECTION + GB:GENE ssdH GB:PRODUCT Aldehyde dehydrogenase family GB:PROTEIN_ID AAZ22092.1 GB:DB_XREF GI:71063089 GB:GENE:GENE ssdH LENGTH 458 SQ:AASEQ MQKTITPIDNTLYIERNYDGAKIEETINGSMKAQKMWADLDIKERVKLLTSFVEDFLSRSDLICEELSRQIGRPISQAAGELKGFKERADYMLSIAEKKLSNIDVAKDDNFKSYIKRKALGVVFVIAPWNYPYLVAVNSIIPAMAAGNSVILKHSAQTPLCSEQLYQSAKKILPKDIFNYLHLNHEDSLKIVSDKRINFVSFTGSVKAGYDVQRATQNKFIDMTLELGGKDPAYARYDCDLEKTVENLVDGSFFNSGQSCCGIERIYVDEKIYNNFLELFVSKTYNYKLGNPLEKETNLGPVVKLSAADFILQQINSAIDKGAKKMIDESKFNFPKEHKNYLIPQVLTNVNHDMAFMTEETFGPCVGIMKVKDDNEAIKLMNDSPYGLTASVWTKDLDVAQKIGNQINTGTFYMNRCDYLDPALSWTGVNETGKGCSLSEVAYEKLTSPKSFHLRKEQ GT:EXON 1|1-458:0| BL:SWS:NREP 1 BL:SWS:REP 37->455|ALDH_CLAHE|2e-54|33.3|414/496| PROS 253->264|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| PROS 225->232|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| BL:PDB:NREP 1 BL:PDB:REP 37->458|1bxsA|1e-50|31.2|416/494| RP:PDB:NREP 1 RP:PDB:REP 33->455|3ed6A|5e-86|26.5|423/502| RP:PFM:NREP 1 RP:PFM:REP 21->435|PF00171|2e-65|33.9|410/440|Aldedh| HM:PFM:NREP 1 HM:PFM:REP 17->451|PF00171|3.8e-119|32.9|434/462|Aldedh| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00171|IPR015590| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00171|IPR015590| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00171|IPR015590| RP:SCP:NREP 1 RP:SCP:REP 23->458|1ad3A|1e-85|23.8|425/446|c.82.1.1| HM:SCP:REP 1->455|1uzbA_|5.5e-114|33.8|450/516|c.82.1.1|1/1|ALDH-like| OP:NHOMO 9779 OP:NHOMOORG 1044 OP:PATTERN 221-1-4754454653-312111-A4432-521-11111111211222124431-1--1-13351--1 6994K84699C547JOI89-8O22Jb88888FRPVRMV**7L6S56781744UHNC89--DDM3ACMKJK9----111-122H11111--12-211---52637384756--------------12222221221277787---6445533431311-113122324555411111111111165745-1-C89999998AAAA99887EDAA6B9AB9HFDF86222221D54555555555555558667711112311111121122-11122---2222111-221111111111122212222222221--111---2-11172223223221-211-2223113131---2211---1--1---1117-5IEE911111B6GBK4469A797FGHHFDHCHGH-44D43I6ANOB-NJJLLLVRNXPPE99C5AHPCAAC8JIEDEEEEEEADC6456811111111----1111-1111-11-11118APaB2AOKCDdYaaYbRKKKGZYbePPNMBNuVuLaTK14GCFC9CB9HDMCKP333-112A62444444122AC664413331332223-3333435443333AA15211322211211111111112-11143981894K7DB99AAAA9AB888987AB9AC-1-5421------A967587A998A878AB-9B9B988B7A98ABB9BB8HIH99894A98998999A77A797I773667621456577657777--1622121888817DKV222112-----2223KJMGI7G7C9H1KKJKKONUGRRNNCKHJ3211132122433A566668B88B8998987555------11441111--------2-2----1---1-12-111-12--111111112-2-2-331 ----CC9-A54-7A7IILKPNQKSTRREECCCCEEDEFEEEEEBDDDDKUUe*mMMFCDDDCD9B6AA4B88D9A894998AA9AC57-JUEICGEECB8B9GFCF-9LBYOiHKNKB9EAEKEMO6UBs*P-SOTBFA9RDEODAFCDAH89aBEDGMJcWCNFBAMBEEAJMC5755*55559JEaTLIY77UFLJG ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 455 STR:RPRED 99.3 SQ:SECSTR ###EEcTTTccEEEEEcccHHHHHHHHHHHHHHHTTTTTccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHTTcccEEEEccccTTEEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHHTcEEEEEccTTccHHHHHHHHHHHHHccTTcEEEcccccTTHHHHHHcTTccEEEEEccHHHHHHHHHHHHTTTcEEEEEcccccEEEEcTTccHHHHHHHHHHHHHGGGGTcTTcccEEEEEHHHHHHHHHHHHHHHTTcccccTTcTTccccccccHHHHHHHHHHHHHHHHTTcEEEEccccccGGGTTTTccccEEEEcccTTcHHHHccccccEEEEEEEccHHHHHHHHTccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccTTccccccGGGEEccccHHHHHHTTEEEEEEEEEccc PSIPRED cEEEEccccccEEEEEcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccEEEEEEEccccEEEEEEcccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHccccccEEEEcccHHHHHHHHHHHHccccEEEEEccccccEEEcccccHHHHHHHHHHHHHHHcccEEEcccEEEEEHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccccccEEccEEccccccccEEEEEcccccEEEEEEEccHHHHHHHHcccccccEEEEEcccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccHHHHHHHHcEEEEEEEccc //