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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : sseA
DDBJ      :sseA         probable thiosulfate sulfurtransferase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  423/915 : Eukaryota  168/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:270 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->267 1ora- PDBj 4e-39 35.5 %
:RPS:PDB   2->269 1boiA PDBj 4e-27 33.7 %
:RPS:SCOP  2->132 1bohA1  c.46.1.2 * 8e-36 35.9 %
:RPS:SCOP  161->268 1okgA2  c.46.1.2 * 2e-23 28.0 %
:HMM:SCOP  1->147 1urhA1 c.46.1.2 * 1.7e-32 29.4 %
:HMM:SCOP  139->270 1rhsA2 c.46.1.2 * 2.1e-24 32.0 %
:HMM:PFM   6->124 PF00581 * Rhodanese 5.8e-15 22.3 103/113  
:HMM:PFM   158->268 PF00581 * Rhodanese 7.3e-10 22.2 99/113  
:BLT:SWISS 2->267 THTM_MOUSE 1e-41 34.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21010.1 GT:GENE sseA GT:PRODUCT probable thiosulfate sulfurtransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 188563..189375 GB:FROM 188563 GB:TO 189375 GB:DIRECTION + GB:GENE sseA GB:PRODUCT probable thiosulfate sulfurtransferase GB:NOTE rhodanese-like, sseA (KEGG b2521) GB:PROTEIN_ID AAZ21010.1 GB:DB_XREF GI:71062007 GB:GENE:GENE sseA LENGTH 270 SQ:AASEQ MSLVDTNWLEKNFDKVKIIDCSWHMPQTERNGFDEYKNIHIKNAIFFDLDKNSKKDTDLPHMLTDAKSWENIVSSMGIKNDDQIVIYDNSDVISSCRCWYNFIYFGHNPELIHVLDGGLKKWIKEDKATTSDIIKIIPTNYIANEKRELVKDINQINKNILENDFNVIDARSLERFEGKVPEPRKGLRSGSIKNSFCLPFSELINEDHTFVSKEKILEKFKSTGYEMGKNIVFTCGSGVTASVLALAYSLIDNKYMPNIYDGSWSEYGKN GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 2->267|THTM_MOUSE|1e-41|34.6|263/297| BL:PDB:NREP 1 BL:PDB:REP 2->267|1ora-|4e-39|35.5|262/293| RP:PDB:NREP 1 RP:PDB:REP 2->269|1boiA|4e-27|33.7|261/285| HM:PFM:NREP 2 HM:PFM:REP 6->124|PF00581|5.8e-15|22.3|103/113|Rhodanese| HM:PFM:REP 158->268|PF00581|7.3e-10|22.2|99/113|Rhodanese| RP:SCP:NREP 2 RP:SCP:REP 2->132|1bohA1|8e-36|35.9|128/149|c.46.1.2| RP:SCP:REP 161->268|1okgA2|2e-23|28.0|107/134|c.46.1.2| HM:SCP:REP 1->147|1urhA1|1.7e-32|29.4|143/0|c.46.1.2|1/2|Rhodanese/Cell cycle control phosphatase| HM:SCP:REP 139->270|1rhsA2|2.1e-24|32.0|128/0|c.46.1.2|2/2|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 883 OP:NHOMOORG 620 OP:PATTERN 11----1122222222-1111---11112111--1-----------1-1-----------------12 --2-1-22111-1-22334-422222444441322223432111111--11131122111321-2221112-----------32--22-----------1-1---1--1---------------------------22233---122111112--22------1-1-2121------------22211---1--1111111111111111111--1111111211------11--------------------------------------------------------------------------------------------1--2222222-2--2--------------------2------------2--1111-----112241121111111111111111-11111111611-1111111111222211111111111111111111111111111-----------------------------11111121111111111-111111111111-1111111111111-12--21111-1211---------------111--1----------------------1---11------------------------------11----111-2111-1-111111--1-----2---------11111111111111111-11111111111111111111111111111111111111111111111---11-111111111111-------------111-1--------------------------111111111211111111---------11221111113211111-----111------1-----------------------------------------------------21- ----11------2211111222223211111-1111121111111111111111111-111111111111111111111111111111-1-111111-11111111-1113322312112122243172GI4-323-222211422211-2-1214123----A3------442-111181112112321311131221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 270 STR:RPRED 100.0 SQ:SECSTR ccEEEHHHHHcccTTEEEEEcccccTTccccHHHHHHHcccTTcEEccTTTcccTTcccTTccccHHHHHHHHHHTTccTTcEEEEEcccTTccHHHHHHHHHHTTcccccEEEEETHHHHHHHTTccccccccccccccccccccGGGEEcHHHHHHHHHHcccEEEEcccHHHHHTccccccccccccEETTcEEccGGGGccTTcccccHHHHHHHHHHTTTccTTccEEEEccccTTHHHHHHHHHHHHTTccccEccHHHHHHHc DISOP:02AL 269-270| PSIPRED cccccHHHHHHHHcccEEEEEEccccccccccHHHHHHcccccEEEccHHHHcccccccccccccHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHccccccEEEEcccHHHHHHcccccccccccccccEEEccccHHHcccHHHHHHHHccccEEEEEcccHHHHcccccccccccccccccccEEccHHHHcccccccccHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccccEEccccHHHHHcc //