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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : sufC
DDBJ      :sufC         FeS assembly ATPase SufC
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  862/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:244 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   1->244 2zu0C PDBj 4e-79 57.0 %
:RPS:PDB   1->240 2d3wB PDBj 2e-30 50.4 %
:RPS:SCOP  1->230 1b0uA  c.37.1.12 * 3e-21 22.3 %
:HMM:SCOP  1->234 1g6hA_ c.37.1.12 * 2.1e-37 29.6 %
:HMM:PFM   41->171 PF00005 * ABC_tran 5.1e-10 27.3 110/118  
:HMM:PFM   8->55 PF03193 * DUF258 9.6e-07 29.8 47/161  
:BLT:SWISS 1->244 SUFC_ECOLI 1e-78 57.0 %
:PROS 145->159|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21559.1 GT:GENE sufC GT:PRODUCT FeS assembly ATPase SufC GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 724429..725163 GB:FROM 724429 GB:TO 725163 GB:DIRECTION + GB:GENE sufC GB:PRODUCT FeS assembly ATPase SufC GB:PROTEIN_ID AAZ21559.1 GB:DB_XREF GI:71062556 GB:GENE:GENE sufC LENGTH 244 SQ:AASEQ MLTIKDLKANIDNKEILKGLNLEIKPGEVHAIMGPNGSGKSTLSNVLSGKKGYTVTGEVKYFNENLLELEIEERAHKGIFLAFQYPLEIPGVNTNIFLKTSLNAIKKAKGEKELDAIEFLKLVKQKAGELKFDEKILSRQLNVGFSGGEKKKNEILQMSILNPKLSILDETDSGLDIDALKIVSEGVNALRSKDSSFLIITHYQRLLDYIKPDFVHVLINGQIVKSGGSELAMELESKGYETLS GT:EXON 1|1-244:0| BL:SWS:NREP 1 BL:SWS:REP 1->244|SUFC_ECOLI|1e-78|57.0|244/248| PROS 145->159|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 63->73|nenlleleiee| BL:PDB:NREP 1 BL:PDB:REP 1->244|2zu0C|4e-79|57.0|244/247| RP:PDB:NREP 1 RP:PDB:REP 1->240|2d3wB|2e-30|50.4|238/244| HM:PFM:NREP 2 HM:PFM:REP 41->171|PF00005|5.1e-10|27.3|110/118|ABC_tran| HM:PFM:REP 8->55|PF03193|9.6e-07|29.8|47/161|DUF258| RP:SCP:NREP 1 RP:SCP:REP 1->230|1b0uA|3e-21|22.3|224/258|c.37.1.12| HM:SCP:REP 1->234|1g6hA_|2.1e-37|29.6|230/254|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 4431 OP:NHOMOORG 1052 OP:PATTERN 44436523555556534143373822114125234541233211-21432886358559363116211 --33434233241412222-221118222221333355531115123323214362122221121415342222243351531343351122252221124526235216112222123311111121321-11-1344243323134552223311111413224133432434432415124342185112DDDEDEBFH9FGCBCFA899AAHFD658B7667AA88A86544454454444444654A3AB28778558B7744673A3694698989875979A8997676989A66765676755668997779899891EJDDDEECF8H76AAA87959678B37531677624655-A68B26A2431112421122358A432579838876879787C1226215244612C774DFBDBDGA7721354552459663333333332221421--------1----2111-11-1--11221412123243354665641333355B733333435B67853155362334657475-4-111---222211111134267721151222113141431323434332-35557335776641111111111-434--2292453413922222-334443-4213331-1111211----73753464444444433-454444434344355455377956423132232232221312273333322224888888788882232221122333129681113152---14111443443212432----33156362334235554555451136565665365442211211233222212-4446556-211-111811--1-1-24323426661342143349AB689C977122 1---46--3---13521-1-1112-2311----2-1----------2--22-1-11411112----11--11-3111--1------11----1---1---1---22-13E72-1-34223-24-48-31BZ9-A332-113-165----25--9-64274761173-9244293-2312A2223336481631142351 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 244-245| PSIPRED cEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHcccccccccEEEEccEEcccccHHHHHHcccEEEcccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHccccEEEEEEccEEEEEccHHHHHHcccccccccc //