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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : tgt
DDBJ      :tgt          queuine tRNA-ribosyltransferase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  830/915 : Eukaryota  150/199 : Viruses  0/175   --->[See Alignment]
c.1.20
:370 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->366 1ozmA PDBj e-108 54.7 %
:RPS:PDB   6->367 3bl3A PDBj e-129 55.2 %
:RPS:SCOP  4->365 1iq8A1  c.1.20.1 * e-103 26.1 %
:HMM:SCOP  3->371 1r5yA_ c.1.20.1 * 9e-132 49.2 %
:RPS:PFM   131->368 PF01702 * TGT 4e-73 50.4 %
:HMM:PFM   131->367 PF01702 * TGT 2.8e-95 48.7 236/238  
:BLT:SWISS 6->366 TGT_SILST e-114 56.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21796.1 GT:GENE tgt GT:PRODUCT queuine tRNA-ribosyltransferase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 970015..971127 GB:FROM 970015 GB:TO 971127 GB:DIRECTION + GB:GENE tgt GB:PRODUCT queuine tRNA-ribosyltransferase GB:PROTEIN_ID AAZ21796.1 GB:DB_XREF GI:71062793 GB:GENE:GENE tgt LENGTH 370 SQ:AASEQ MALKNFKFNVIESNKFARVGVIETHRGNIQTPAFMPVGTQATVKACLIDDVIKTGSEIILSNTYHLMIRPGVDRIISAGGLHKFMNCKLPILTDSGGFQVMSLSKLNKVDREKGAIFNSHVDGKKFILSPEESIRVQKGLDSDIVMIMDECPKKTTDYKVINKSMELSIYWAERSKIAFGLNPHKALFGIIQGGLFKDLRTKSLNNLIKIGFDGYAIGGLAVGESQNEMFSVLDDLKNIMPDDKPRYLMGVGTPADILGAVKRGVDMFDCVMPTRSGRTGLAFTWNGRVNIKNNKYKNDNEPLDPNCSNLNLNKYSKNYINHLFNTNEILGSTLLTLHNINFYQELMSSIRENIKKGTFDKFHDEYIDKL GT:EXON 1|1-370:0| BL:SWS:NREP 1 BL:SWS:REP 6->366|TGT_SILST|e-114|56.1|360/376| BL:PDB:NREP 1 BL:PDB:REP 6->366|1ozmA|e-108|54.7|360/372| RP:PDB:NREP 1 RP:PDB:REP 6->367|3bl3A|e-129|55.2|355/367| RP:PFM:NREP 1 RP:PFM:REP 131->368|PF01702|4e-73|50.4|238/238|TGT| HM:PFM:NREP 1 HM:PFM:REP 131->367|PF01702|2.8e-95|48.7|236/238|TGT| GO:PFM:NREP 3 GO:PFM GO:0006400|"GO:tRNA modification"|PF01702|IPR002616| GO:PFM GO:0008479|"GO:queuine tRNA-ribosyltransferase activity"|PF01702|IPR002616| GO:PFM GO:0008616|"GO:queuosine biosynthetic process"|PF01702|IPR002616| RP:SCP:NREP 1 RP:SCP:REP 4->365|1iq8A1|e-103|26.1|326/355|c.1.20.1| HM:SCP:REP 3->371|1r5yA_|9e-132|49.2|368/0|c.1.20.1|1/1|tRNA-guanine transglycosylase| OP:NHOMO 1194 OP:NHOMOORG 1035 OP:PATTERN 11-1-111111111111111-112---1-1--11111111111111-11111-1-111-111111111 1111-1111111111------1---1------11111111--1---1-----11111111---1-------111111111111111111111-1111--111111111-1111111111111111111111111112222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11-----11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111-1111111111111112221211121-11111111111111111111111111-11111111111111111111111111111111111111--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222211111111111111111111111111111111111111111111111111111111111-1-111111--11111111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111-1-------------------------1111111111111 2311231-511111-111112221111111111111-11111111121111111111111112-----------------------11-1111111----1--2221233233212-11---2222-3-6D2-113-1--1112112---2--11111121112111223322332113W2323132341-22332321 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 365 STR:RPRED 98.6 SQ:SECSTR ###cccEEEEEEEETTEEEEEEEETTEEEEEcEEEcEETTcccTTccHHHHHHTTcccEEEcHHHHHHTTcHHHHHHTTcHHHHHTccccEEEcccHHHHHHccccEEccccccEEEEccTTccEEEEcHHHHHHHHHHHTccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHTcHHcEEEEEEccTTcHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHGGGccTTccEEETTcccHHHHHHHHHTTccEEEccHHHHHHHHTEEccTTccEETTcGGGTTcccccccccccHHHHHccHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHH## DISOP:02AL 1-4| PSIPRED ccccccEEEEEEEccccEEEEEEEcccEEEcccEEEcccccccccccHHHHHHcccccHHHHHHHHHccccHHHHHHcccHHHHccccccEEEccccccccccccccccccccccEEEEcccccEEEEcHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHcccccHHHHHHHHHccccEEEEccccEEccHHHHccccccccccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHc //