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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : thrC
DDBJ      :thrC         Threonine synthase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  536/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:459 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->420 1kl7A PDBj 7e-97 48.8 %
:RPS:PDB   1->458 2c2bA PDBj 6e-48 19.6 %
:RPS:SCOP  1->449 1kl7A  c.79.1.1 * e-139 46.5 %
:HMM:SCOP  1->461 1kl7A_ c.79.1.1 * 2.2e-146 42.3 %
:RPS:PFM   106->306 PF00291 * PALP 2e-07 26.4 %
:HMM:PFM   100->402 PF00291 * PALP 6e-28 21.7 230/297  
:BLT:SWISS 1->456 THRC_PSEAE e-113 43.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20952.1 GT:GENE thrC GT:PRODUCT Threonine synthase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(136574..137953) GB:FROM 136574 GB:TO 137953 GB:DIRECTION - GB:GENE thrC GB:PRODUCT Threonine synthase GB:PROTEIN_ID AAZ20952.1 GB:DB_XREF GI:71061949 GB:GENE:GENE thrC LENGTH 459 SQ:AASEQ MKYISTRDNSKEYSFEEVFIKGLADDGGLFIPKKIKKYTTEELNSLSNLSYQDLAKKIIFPFIGDFMTEAELSLIVDKSYSSFRKDNVVDLIKIGDAKILELFHGPTLAFKDIAMQLLGNFYEYYLSKNSKQINIIVATSGDTGAAAIDAIKGKENINIFVLHPHNKVSQVQRKIMSTVKEKNVFNIAINGNFDDCQNLVKAMFADKEFSNSINMSGVNSINWARIIAQAVYYFYTYFQIRDDRLVNFSVPTGNFGDVYAGYLSKKMGLPINKLIVATNQNDILHRAITNGKYEAETVIETNSPSMDIQIASNFERLIYDLNDFNDVETGNVMKKIKEEGKYIIPKDKLQKISKDFLSENMSETEVLNIIKDVHNRYNVILDPHSAIGFGALKKINIEGNNIVLATAHPCKFPDAIDKSIGIKSSLPNELQYIMNEKENYDIISNNINETQKYIKEKLQ GT:EXON 1|1-459:0| BL:SWS:NREP 1 BL:SWS:REP 1->456|THRC_PSEAE|e-113|43.6|456/469| BL:PDB:NREP 1 BL:PDB:REP 3->420|1kl7A|7e-97|48.8|412/503| RP:PDB:NREP 1 RP:PDB:REP 1->458|2c2bA|6e-48|19.6|408/443| RP:PFM:NREP 1 RP:PFM:REP 106->306|PF00291|2e-07|26.4|193/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 100->402|PF00291|6e-28|21.7|230/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 1->449|1kl7A|e-139|46.5|447/509|c.79.1.1| HM:SCP:REP 1->461|1kl7A_|2.2e-146|42.3|461/511|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 807 OP:NHOMOORG 702 OP:PATTERN ------------------------------------------------11------------------ -----111111-11---------------------------------1---1-------------------11111111111------111111---11--1-1111111---------------11111111111-------------------------------------------------1----1-----------------------------------------1---------------------1-111111--11--11-1-111111111111111111111111111-------------11111111111-111111111111111111---111-2-11-1111111-------1--1---1111-11-1111111111111111111111111-1111111111111111111111121111111111111111111111111111111-----------------------------11111111111111111111111111111111111111111111111111111111111211111111111111111----1----------111111111------1-1111111111111111111111111--1111111-1111111111111111111111-1-----11111111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111111------1111--111111111-11111111-------1111111111212121211111111-1111111111111111111111111111111111--1---------------2--------------------------------------1- ------2-211-11111111111111111111111111111111111122111111211111111111-1111111111111111111-12111111111111111-2514131223--1121253-418G2-42312113122322122211423222111-431-------1-----8111-----11--2211112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 458 STR:RPRED 99.8 SQ:SECSTR EETTccTTccccccTTccccccccTTcccEEEEEHHHHTTccHHHHHHHHHTTTTcccTTTTcTTGGGGGGTcTTccTTTccccccccccEEEcccEEEEETTccccccTHHHHHHHHHHHHHHHHHTTccccEEEEccccHHHHHHHHHHHHHTTccEEEEEETTTccccTTHHHHHTTcETcEEEEEcccHHHHHHHHHHHHHHccEEEEccEEEcccccHHHHHHHTHHHHHHHHHTTTccccEEEEEccccHHHHHHHHHHHHHHHTTccccEGGGcHHHHEHHTTTccccccccccccGGGcccccTTHHHHHHHHHHTTcEEEcHHHHHHHHTTcEEEEEHHHHHHTTccEEEEEcHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHccTTccEEEEcccGGGccHHHHHHHTTccTcTTcccTTcccccccccccccHHHHHHHHHHHc# PSIPRED ccccccccccccccHHHHHHccccccccEEcccccccccHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccEEccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHccHHHHHHccEEEEEcccHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHccccccEEEEEcccccHHHHHHHcccccccccccccccHHHHcccccHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHcccEEEccHHHHHHHHHHHHHHccEEEcccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcc //