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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : ucpA
DDBJ      :ucpA         oxidoreductase
Swiss-Prot:             

Homologs  Archaea  55/68 : Bacteria  879/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->247 2ag5C PDBj 2e-66 51.0 %
:RPS:PDB   7->226 1a27A PDBj 5e-44 21.5 %
:RPS:SCOP  11->247 1pwxA  c.2.1.2 * 4e-45 19.6 %
:HMM:SCOP  1->244 1zemA1 c.2.1.2 * 5e-71 37.8 %
:RPS:PFM   11->166 PF00106 * adh_short 3e-22 39.4 %
:HMM:PFM   9->166 PF00106 * adh_short 7.4e-27 22.9 153/167  
:BLT:SWISS 4->247 BDH2_MOUSE 9e-71 52.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21593.1 GT:GENE ucpA GT:PRODUCT oxidoreductase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 752477..753220 GB:FROM 752477 GB:TO 753220 GB:DIRECTION + GB:GENE ucpA GB:PRODUCT oxidoreductase GB:PROTEIN_ID AAZ21593.1 GB:DB_XREF GI:71062590 GB:GENE:GENE ucpA LENGTH 247 SQ:AASEQ MSNRLEGKNIIVTAAGQGIGKATAIALHNEGANVTATDLNNKTLAELNKEYPKIKVQTLDSTDNNAISEFMKSVDKVDVLFNAVGFVHHGTILECEEKDWDFSFDVNVKSMYQMCKAILPLMVKQNGGSIINVSSCASSLKGFPNRFVYGTTKGAVIGLTKSIAADFVKQNIRCNSIAPGTVFSPSWQDRVNQSPDPVQAKKDFIARQPMGRLGTAEEIAAVAVYLAGDDATFTTGTTISVDGGISI GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 4->247|BDH2_MOUSE|9e-71|52.7|243/245| SEG 227->238|agddatfttgtt| BL:PDB:NREP 1 BL:PDB:REP 4->247|2ag5C|2e-66|51.0|243/244| RP:PDB:NREP 1 RP:PDB:REP 7->226|1a27A|5e-44|21.5|219/285| RP:PFM:NREP 1 RP:PFM:REP 11->166|PF00106|3e-22|39.4|155/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 9->166|PF00106|7.4e-27|22.9|153/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 11->247|1pwxA|4e-45|19.6|235/252|c.2.1.2| HM:SCP:REP 1->244|1zemA1|5e-71|37.8|241/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 14727 OP:NHOMOORG 1127 OP:PATTERN 22212269B9B9A996181411119338665711---------21144--722-23112132753-34 HIW3a31566D482cvlKK-Km44Z*KJKKKSu***Tu**7bB*KEA53D82NHH63911DFQ4FFTTTNC11112111286Q21323669626231--97W5GF*AZ7J1111111111111136547C733976DCCFD222GBFDGD7575633322753282BGBY6222232222222FA866771G8PHHHHHJGKHKIIJKGODMMIOIKHBHHOKKD877786Kh855555435555554B9AAA81D19B15111CF559967879B766646565634445554565555464466676666635533255584359D666544554684662796633117922286123225333345433A2CiGGM11111LB*fg578UKQPMJKJJIIKIJKT-FKOHCfEMYsd1*ddQpin***roSUGGDKJTMCMOEHL99999999MSRB79A911111221111122331221222121111CIpuHAIdVNa*ouoxuNSSTOhhsxWVVVAU*c*Ozka47PQNI8IDCTHXHie9F7388B973343333339JE78O5B511211433226785F6494689ALR342333233223123333333332344559A9BAEFAN87566677EA9775B68A67A1-4324711-111BDHG7H9BFFDBCCCCC-FBCBDBCADCFCECBCCBEPVQHA9ABA7899AA99A98989ATAB9BA8D51A999A9999ABA111735333CCBC3DJMI222748133324572LNMROAL8D9K8PQKOJOUdJMIROHPKM9565575554778H65665BA79AGFGEHDCABD74542235DC98AA--------1-4----2-1-3-1------3-------3543166676292 22-1KKD-523-5BEhibZeZhXrhnhLNAGEGJMHFTLOJOPJEFVVTcgr**SWOIEMHJ64G2663722BAA221228AAA8B1B-PfGiFaIBAABE8FJHF-ACA*OOGFQE64947I8SI5F6NwF-GBK43A7F7AIA67554G25F8FDPUghUDfVLCICNqHSOI5692s2228KEINtaeBCDUKIHE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 100.0 SQ:SECSTR HGGccTcEEEEEcccccHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHHHHHHHTTccTTcHHHHHHHHHTcTTccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEGGGGTcccTTcHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEccccccTTTTccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcGGGTTccccEEEEcccccc DISOP:02AL 246-248| PSIPRED ccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEcccccc //