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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : y4tM
DDBJ      :y4tM         X-Pro dipeptidase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  305/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.55.2d.127.1
:388 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->381 1chmA PDBj 9e-14 21.9 %
:RPS:PDB   1->387 1chmA PDBj 9e-55 19.0 %
:RPS:SCOP  1->154 1chmA1  c.55.2.1 * 1e-23 20.7 %
:RPS:SCOP  155->385 1chmA2  d.127.1.1 * 8e-32 19.9 %
:HMM:SCOP  1->154 1chmA1 c.55.2.1 * 2.4e-35 31.4 %
:HMM:SCOP  156->388 1kp0A2 d.127.1.1 * 4.6e-45 28.7 %
:RPS:PFM   11->154 PF01321 * Creatinase_N 1e-06 29.9 %
:RPS:PFM   165->361 PF00557 * Peptidase_M24 8e-15 29.0 %
:HMM:PFM   164->372 PF00557 * Peptidase_M24 4.2e-25 25.6 195/203  
:HMM:PFM   11->156 PF01321 * Creatinase_N 2.9e-24 30.5 131/131  
:BLT:SWISS 1->388 Y4TM_RHISN 6e-80 38.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ22142.1 GT:GENE y4tM GT:PRODUCT X-Pro dipeptidase GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1275242..1276408) GB:FROM 1275242 GB:TO 1276408 GB:DIRECTION - GB:GENE y4tM GB:PRODUCT X-Pro dipeptidase GB:PROTEIN_ID AAZ22142.1 GB:DB_XREF GI:71063139 GB:GENE:GENE y4tM LENGTH 388 SQ:AASEQ MNFTKEEYKNRLKKVQKSMQDKGIDVLISQDPSNMNYLTGYDAWSFYYAQCVIVHINADEPLCFVRDQDAGGAYIKTYLKDENIIKYGEKYIHNWPLHPYEALTDIIKERKWDKLSIGVEMDSHYFTAYCYEKIKSGLPNAKISDCERLVNWVRVVKSDTEINLMKAASLIVQTGMKKAFEVINPGVRQCDAVSEIQAALIKGTPEFGGDYASIVPMLPTGKGTSASHLTWTEDKFVEGEATIIELSGSHKKYHCPMARTVLLGKADQLKIDTMKKTNEALQAGIDAIKPGKTADDVAQAFWKVLDKYGIEKTSRTGYSIGIGYPPDWGEHTLNISKGDMTILEPNITFHMIAVMQFGNWGVEASEAIRVTDQGSELFCNFSKDLHIK GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 1->388|Y4TM_RHISN|6e-80|38.1|388/392| BL:PDB:NREP 1 BL:PDB:REP 3->381|1chmA|9e-14|21.9|365/401| RP:PDB:NREP 1 RP:PDB:REP 1->387|1chmA|9e-55|19.0|373/401| RP:PFM:NREP 2 RP:PFM:REP 11->154|PF01321|1e-06|29.9|127/130|Creatinase_N| RP:PFM:REP 165->361|PF00557|8e-15|29.0|186/203|Peptidase_M24| HM:PFM:NREP 2 HM:PFM:REP 164->372|PF00557|4.2e-25|25.6|195/203|Peptidase_M24| HM:PFM:REP 11->156|PF01321|2.9e-24|30.5|131/131|Creatinase_N| GO:PFM:NREP 2 GO:PFM GO:0016787|"GO:hydrolase activity"|PF01321|IPR000587| GO:PFM GO:0009987|"GO:cellular process"|PF00557|IPR000994| RP:SCP:NREP 2 RP:SCP:REP 1->154|1chmA1|1e-23|20.7|140/155|c.55.2.1| RP:SCP:REP 155->385|1chmA2|8e-32|19.9|231/246|d.127.1.1| HM:SCP:REP 1->154|1chmA1|2.4e-35|31.4|140/0|c.55.2.1|1/1|Creatinase/prolidase N-terminal domain| HM:SCP:REP 156->388|1kp0A2|4.6e-45|28.7|230/246|d.127.1.1|1/1|Creatinase/aminopeptidase| OP:NHOMO 466 OP:NHOMOORG 332 OP:PATTERN --1----21111111112-1-2--------1------------------------1-313-11-1-1- --1---------1-1--11-1----111111------111------11----2121----------1-1---------1-1-2---11----------------------1111111-1--------11-1-1-11111--1--1--1--------------------------------------11-1---13333333323333331122-133321333111----121111111111111111111--12122122222112222121---2111121-11111111111111111111111111111111111111112-1-2223222121-1111111111--1---1--11111231--111-1------1--------11------1-11111111114--------14B--433122422233------121311131---------------------------------------------3--11------111111-----11-2-------21------------------11-----------------------1----1---1---1-1---1---------11------------------------------1-1111-1-------1----------1---1-----------1-----------------------------------1-----------------------------------------------------------111-------------------1---------1------2-11-------------1---------1-1----1-1-------1----1---------------------1--1-11---1-11---------11--------- -------------------1-------22---------------------------------------------------------------------------------5---------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 388 STR:RPRED 100.0 SQ:SECSTR ccccHHHHHHHHHHHHHHHHHTTccEEEEccHHHHHHHHccccccTTcccEEEEcEcTcccEEEEEEGGGTTHHHHHccccEEEEEEEEccEEEEcTTcTTHHHHHHHHHcccccEEEEcTTTcHHcHHHHHHHHHHcTTcEEEEcHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHHHcccccccccEEEEEEGGGGGcTTcccccccccTTcEEEEEEEcEETTEEccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHTcGGccccccccccEETTEEccTTccccTTccccccTTcEEEEEcTTcTTcEEEEccEEEEEETTEEEEcccccccHHHH PSIPRED ccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHcccccccccccEEEEEEEccccEEEEEEcccccHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHccccccEEEEEcccccccHHHHHHHHHHccccEEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccEEEcccccccccccccccEEccccEEEEEEEEEEccEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEcccEEEEccccccccccEEEEEEEEEEcccccEEccccccccEEc //