[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yadG
DDBJ      :yadG         ATP-binding component of ABC transporter
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  909/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:311 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   4->229 2it1B PDBj 5e-38 41.4 %
:RPS:PDB   1->237 2dwoA PDBj 1e-47 9.5 %
:RPS:SCOP  6->211 1sgwA  c.37.1.12 * 4e-44 23.1 %
:HMM:SCOP  8->214 1ii8.1 c.37.1.12 * 3.8e-66 38.2 %
:RPS:PFM   46->164 PF00005 * ABC_tran 4e-12 36.2 %
:HMM:PFM   46->164 PF00005 * ABC_tran 2.5e-27 35.7 115/118  
:HMM:PFM   11->52 PF02463 * SMC_N 5.7e-05 31.7 41/220  
:HMM:PFM   277->308 PF05389 * MecA 0.00063 28.1 32/220  
:BLT:SWISS 4->307 YADG_ECOLI 4e-63 43.4 %
:PROS 136->150|PS00211|ABC_TRANSPORTER_1
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21630.1 GT:GENE yadG GT:PRODUCT ATP-binding component of ABC transporter GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 788073..789008 GB:FROM 788073 GB:TO 789008 GB:DIRECTION + GB:GENE yadG GB:PRODUCT ATP-binding component of ABC transporter GB:PROTEIN_ID AAZ21630.1 GB:DB_XREF GI:71062627 GB:GENE:GENE yadG LENGTH 311 SQ:AASEQ MSEIQISINNLSKVYDNGFKALNNVSLKVKQGEILAMLGPNGAGKTSLISIICGIVKPTSGTVTIDNYDIIKDYRETRSRIGLVPQELNLESFETVFDTVSYSRGLYGKAPKPEHIEKILKDLSLWDKKDQRLRQLSGGMKRRVLIAKALSHEPKILFLDEPTAGVDVELRRDMWMVVDDLRKKGVTIILTTHYIEEAEAIADRVAVINQGEIIVVEDKKELIKKMGHKKLTIELQKKITEIPEDLSKYNLEISEEQMSLIYTYNVQAEKTGITDLLQDIKDTGLKLKDLKTEQSTLEKIFVDLVKENNEI GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 4->307|YADG_ECOLI|4e-63|43.4|295/308| PROS 136->150|PS00211|ABC_TRANSPORTER_1|PDOC00185| COIL:NAA 21 COIL:NSEG 1 COIL:REGION 280->300| SEG 281->292|kdtglklkdlkt| BL:PDB:NREP 1 BL:PDB:REP 4->229|2it1B|5e-38|41.4|222/361| RP:PDB:NREP 1 RP:PDB:REP 1->237|2dwoA|1e-47|9.5|221/449| RP:PFM:NREP 1 RP:PFM:REP 46->164|PF00005|4e-12|36.2|116/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 46->164|PF00005|2.5e-27|35.7|115/118|ABC_tran| HM:PFM:REP 11->52|PF02463|5.7e-05|31.7|41/220|SMC_N| HM:PFM:REP 277->308|PF05389|0.00063|28.1|32/220|MecA| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 6->211|1sgwA|4e-44|23.1|195/200|c.37.1.12| HM:SCP:REP 8->214|1ii8.1|3.8e-66|38.2|204/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 57089 OP:NHOMOORG 1175 OP:PATTERN YYRDXPNOeddZdZfVrNVWPTUc*RVnqelXKGEEFDIHIGEWdTbrPS**lAUjVZdSXNNId29C YfzQ*jkjww*ciYbYbUT-TpEEg*UUUUUWyusw****Y*f****q*tkR***UWkGH***p******lcbbb*fehR*jqCBEBCYZYV8TGLL-1JIXMPNkTfUZ6CBBBACDEDDDDDLXUOVcQMYXdVrzz**POO*d*rr*mmrioZaTMOLQMkldq***dOUKROOLTNRLMqffUT*oBek*************************lu***r*********esttttopppsssppelgkk*ohh**iSmbq**TT**iaWerpmorzz**xr****x*xxsuw*vyxighgdiiijkjgg*vvmmmwvxxu***********o*s****iqqn**k***ryXM**yqcgltVcpixuRihiPjWXXNNPQNPhY***fXy****************-rv*mj*u***VE**************NNO**********XWXXXXXX*eiMUnj*887777776689C9EG9DCDA9BBB98B6KFFHDI************************q********CS****q*rv******gwoObNTodLNKJLKKUWUeumj**Xkb*mbpyfdnMjfdZZboZeceee**Z*RPPVIOOOPMJCDDEFDEDDKUIINONxq*U*bkMZT*TbcebSZgbZYaZbdcche7-IOYUQ231433****d************-*************yz**y******somvxqsrutuusqsvssq*xuu**x*W7************44KMGJFGHQRSRRM*r*fdebbaNQSONXQVjPRTSRJWLTZsk****z********p***IHHFGJIGHOowv*yyyzy*****SWTSOTSOQRIGGGB9TXSSPQOOA98A99AB*EgFECDI-DHHDLJERRNDIODJHBBCes*dcv*wwuFiS 3377voO1kMCIdmaRPTPRYcYfXhcRQILHKUSSMVPRNUUJHISQTYcaofTTRFLPPQNEJ9BD3CFACIKCG2DFEGFDII8E-LYGPMINIGFGD7IZUY9as**hkhtlnRLJFRaP*xH*K**y4*b*OOPIkLR*bGPKNHjGG*IjZY*Q**V*amO*ku*uqrYKNOK*PRRHP****T**RR****g ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 308-311| PSIPRED cccEEEEEEEEEEEEcccEEEEEccEEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHcccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEEccccEEEEEEEcccccHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHcccccc //