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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yajC
DDBJ      :yajC         YajC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  77/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:94 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   24->80 PF02699 * YajC 5e-08 44.6 %
:HMM:PFM   4->81 PF02699 * YajC 4e-34 53.2 77/83  
:BLT:SWISS 24->93 YAJC_SHIFL 2e-10 33.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21787.1 GT:GENE yajC GT:PRODUCT YajC GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 959612..959896 GB:FROM 959612 GB:TO 959896 GB:DIRECTION + GB:GENE yajC GB:PRODUCT YajC GB:PROTEIN_ID AAZ21787.1 GB:DB_XREF GI:71062784 GB:GENE:GENE yajC LENGTH 94 SQ:AASEQ MDQGIGQFIPLILIFVIFYFFLIRPQQKKVKEHKAMVENLSRGDKVVTSAGIIGTVERIIDNEKVEVQIADNVKVEIIKSTGIQGLLNSPEVKK GT:EXON 1|1-94:0| BL:SWS:NREP 1 BL:SWS:REP 24->93|YAJC_SHIFL|2e-10|33.3|69/110| TM:NTM 1 TM:REGION 3->25| SEG 8->23|fiplilifvifyffli| RP:PFM:NREP 1 RP:PFM:REP 24->80|PF02699|5e-08|44.6|56/82|YajC| HM:PFM:NREP 1 HM:PFM:REP 4->81|PF02699|4e-34|53.2|77/83|YajC| OP:NHOMO 77 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------11111-1111111------------11-11-11--1----1---------1-111111111111--------1----1-1111------1---------------1-111-------------------------------------------11---1-------1-----1-------------111--1----1-----------------1--------------------------1-------1----------------------------------------------------------------------------------------------------------------------------1----------1------------------------------1111----------------------1--------------1111111111-------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 26-39, 91-94| PSIPRED cccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEEccccEEEEEEcccEEEEEEEHHHHHHHcccccccc //