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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yceA
DDBJ      :yceA         rhodanese domain protein
Swiss-Prot:Y1074_PELUB  RecName: Full=UPF0176 protein SAR11_1074;

Homologs  Archaea  0/68 : Bacteria  521/915 : Eukaryota  75/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->205 3gk5A PDBj 2e-07 37.0 %
:RPS:PDB   98->231 2a2kA PDBj 3e-21 19.1 %
:RPS:SCOP  110->243 1yt8A3  c.46.1.2 * 7e-23 17.2 %
:HMM:SCOP  84->239 1qb0A_ c.46.1.1 * 2e-27 27.5 %
:RPS:PFM   118->199 PF00581 * Rhodanese 2e-10 40.2 %
:HMM:PFM   114->204 PF00581 * Rhodanese 3.2e-14 31.9 91/113  
:BLT:SWISS 1->301 Y1074_PELUB e-143 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21878.1 GT:GENE yceA GT:PRODUCT rhodanese domain protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION complement(1040726..1041631) GB:FROM 1040726 GB:TO 1041631 GB:DIRECTION - GB:GENE yceA GB:PRODUCT rhodanese domain protein GB:NOTE similar to Shewanella oneidensis MR-1 sp|Q8EES8|YM90_SHEON hypothetical UPF0176 protein GB:PROTEIN_ID AAZ21878.1 GB:DB_XREF GI:71062875 GB:GENE:GENE yceA LENGTH 301 SQ:AASEQ MFDVFGFYKFKKLTSLKKNKILLQDYLIKKNIRGTIIIANEGVNATISGKANDLKSTITKIKKILNFKKFDSENISKSKFQPFHKPKVKIKKEVVPMGLSLSSKNKKNNHIDPKKWNKLINDKDTLVLDSRKPFEYNVGTFKRSVNPDVANFREFPKYLNKLKKTKPIAMFCTGGIRCEKASVFLEKKGFKNVYQLKGGILNYLKNIKKKESLWNGECFVFDNRISVKHGLITGTYSMCSGCRKPVSPKDKKSKKYEEGVSCVNCHDNLTQTQKERFRMRQKQINLAKKTGSKHIFQKEFK GT:EXON 1|1-301:0| SW:ID Y1074_PELUB SW:DE RecName: Full=UPF0176 protein SAR11_1074; SW:GN OrderedLocusNames=SAR11_1074; SW:KW Complete proteome. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->301|Y1074_PELUB|e-143|100.0|301/301| SEG 9->23|kfkkltslkknkill| SEG 57->64|titkikki| SEG 82->96|pfhkpkvkikkevvp| SEG 244->255|kpvspkdkkskk| BL:PDB:NREP 1 BL:PDB:REP 121->205|3gk5A|2e-07|37.0|81/100| RP:PDB:NREP 1 RP:PDB:REP 98->231|2a2kA|3e-21|19.1|131/171| RP:PFM:NREP 1 RP:PFM:REP 118->199|PF00581|2e-10|40.2|82/108|Rhodanese| HM:PFM:NREP 1 HM:PFM:REP 114->204|PF00581|3.2e-14|31.9|91/113|Rhodanese| RP:SCP:NREP 1 RP:SCP:REP 110->243|1yt8A3|7e-23|17.2|128/157|c.46.1.2| HM:SCP:REP 84->239|1qb0A_|2e-27|27.5|153/178|c.46.1.1|1/1|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 700 OP:NHOMOORG 596 OP:PATTERN -------------------------------------------------------------------- -----111111111-----------------------111--------1---111111-----------------------------1--------1--1-1111111-1111111111111111-------------------1-111-111--1111111111--111-1111111111111-1-----1-11111111121111111-1111111---211111111112-11111111111111111111----------------------1111111---1--1111111111111111111111111111111111----------------------------------------------1-----1111-11111--111111-----11111111111----------1--111111111111--111111----11111111111---1----1111111111111111111111111111111111-11111111111111111111111111111111111111112--12211-22-1111---------------1-------------------------------------------------------------11111111-111111-111111111111------1111111111-111111111111-11111111111111111111111111-111111111111111111-1111111111111111111--11111111111-1111---------------1111111111-111111111111111111111111111-1--111111111--11111111111111----111111----------11111---------------------------------- --------------1--------------------------------1-------------------------------------------------------332--3-2111-1111111113112-4E1-32311111-1111111-1--111111111-2-----------1112B333114345-436675552 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 147 STR:RPRED 48.8 SQ:SECSTR ################################################################################################ccccccccccTTcEEcHHHHHHHHTTTEEEEEEcccHHHHHTcEETTcEEcccHHHHHHHHHEEccccccHHHHHHHHHHHHHHHTccTTccccccEEEETTHHHHHTTTcGGcccGEEccccccTTcGGGHHHHccHHHHHHHTTc########################################################## DISOP:02AL 273-290, 300-301| PSIPRED cEEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEccHHHHHHHHHHHHHccccccEEEEccccccccccHHHcccHHHHHHcccccccccccccccccHHHHHHHHccccEEEEEcccHHHHHHcccccccccccccHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHcccHHHEEccccHHHHHHHccccccEEEccEEEEcccEEEccccccccEEccccccccccHHHHccccHHccEEcHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccc //