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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yggA
DDBJ      :yggA         Lysine efflux pump
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:201 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   12->198 PF01810 * LysE 1.3e-30 24.7 186/192  
:BLT:SWISS 1->199 ARGO_SALPK 7e-13 31.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21618.1 GT:GENE yggA GT:PRODUCT Lysine efflux pump GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 774387..774992 GB:FROM 774387 GB:TO 774992 GB:DIRECTION + GB:GENE yggA GB:PRODUCT Lysine efflux pump GB:PROTEIN_ID AAZ21618.1 GB:DB_XREF GI:71062615 GB:GENE:GENE yggA LENGTH 201 SQ:AASEQ MDYLILGFLTGLSLILAIGAQNIFVIEQGLKKQYIFIVCLICSISDFLLIFLGIFLFQYLNHFFTPTIELVFNILLLIFLLHFIWGKIKTKVSETSFDVDSKTNNLSNIVVKTLGFTFLNPHVYSDTVFFLGNFSKSLSQVDKYYFGAGAAISSFLFFFIIGYLSKYFSKYLKSATVWKRINYLIILFMSILALTVLMEII GT:EXON 1|1-201:0| BL:SWS:NREP 1 BL:SWS:REP 1->199|ARGO_SALPK|7e-13|31.3|198/211| TM:NTM 5 TM:REGION 4->26| TM:REGION 36->58| TM:REGION 65->87| TM:REGION 146->168| TM:REGION 181->201| SEG 47->57|flliflgiflf| SEG 70->84|lvfnilllifllhfi| SEG 146->165|fgagaaissflfffiigyls| HM:PFM:NREP 1 HM:PFM:REP 12->198|PF01810|1.3e-30|24.7|186/192|LysE| OP:NHOMO 32 OP:NHOMOORG 32 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1----11---------------1---------------------------------------------1--------------------------------------------------------------1----------------------------------------------1----------------------------1-------11111--111111111111--------------------------------------------------1-1----------------------------------------------------------------------------------1--1----------------------------------------1--------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 89-107| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHc //