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Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yliI
DDBJ      :yliI         glucose dehydrogenase (pyrroloquinoline-quinone) precursor
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  278/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.68.2
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->356 2g8sB PDBj 5e-40 33.0 %
:RPS:SCOP  24->356 1c9uA  b.68.2.1 * 3e-26 27.9 %
:HMM:SCOP  40->349 1cruA_ b.68.2.1 * 2.1e-27 24.9 %
:RPS:PFM   225->323 PF07995 * GSDH 6e-13 41.8 %
:HMM:PFM   225->325 PF07995 * GSDH 6.5e-25 39.0 100/106  
:BLT:SWISS 39->356 YLII_ECOLI 9e-45 32.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ21126.1 GT:GENE yliI GT:PRODUCT glucose dehydrogenase (pyrroloquinoline-quinone) precursor GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 301545..302636 GB:FROM 301545 GB:TO 302636 GB:DIRECTION + GB:GENE yliI GB:PRODUCT glucose dehydrogenase (pyrroloquinoline-quinone) precursor GB:PROTEIN_ID AAZ21126.1 GB:DB_XREF GI:71062123 GB:GENE:GENE yliI LENGTH 363 SQ:AASEQ MVVDQNFLKVKKYFLLIIFFLLFASKSYSNNYTFTKIIELDEPWGSSFINNDEIIITEKSGKIKIVNIISKEVTEIKHNLNFLEVGQGGLLDIIHQDNTLWISYSEDRGNLKTSTSIAKAQLNKQELNFKNIFQANPPIDSGYHFGSRLAIKDNYIYASAGERGQGMIAQDPTKHPGSIIRIHTDGRIPKDNPKFTGKPDWLPEIYQIGVRNPQGLTLSDYDGKIYLSNHGARGGDWFGEAKKGENYGWKILGWGGKNYSGIPIGPKWKPGFTKAIQYWVPSIATSAITIYRGNEFKEWNGHALVTSLKDRSLRKLIFNDPTNVKENVIFKDNVGRIRDIQVHPSNGKIFFLSENALWLMEKK GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 39->356|YLII_ECOLI|9e-45|32.8|314/371| TM:NTM 1 TM:REGION 4->26| SEG 14->23|flliiffllf| BL:PDB:NREP 1 BL:PDB:REP 39->356|2g8sB|5e-40|33.0|309/341| RP:PFM:NREP 1 RP:PFM:REP 225->323|PF07995|6e-13|41.8|98/103|GSDH| HM:PFM:NREP 1 HM:PFM:REP 225->325|PF07995|6.5e-25|39.0|100/106|GSDH| GO:PFM:NREP 3 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF07995|IPR012938| GO:PFM GO:0016901|"GO:oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor"|PF07995|IPR012938| GO:PFM GO:0048038|"GO:quinone binding"|PF07995|IPR012938| RP:SCP:NREP 1 RP:SCP:REP 24->356|1c9uA|3e-26|27.9|326/444|b.68.2.1| HM:SCP:REP 40->349|1cruA_|2.1e-27|24.9|277/0|b.68.2.1|1/1|Soluble quinoprotein glucose dehydrogenase| OP:NHOMO 333 OP:NHOMOORG 288 OP:PATTERN ------------------11----2--11-12----------------------------------12 --1-1--1-------------1---1------11111222-1-11----11--11-----111--1--11------------1----------------1-1-1122511--------------------1----1---11----111-111-1111------11--1--1---------------11----------------------111--------1111-------1--------------------------------------------------------------------------------------------------------------------------------------------2-11111--------1-11-11111----------1-2222112-1-2-111111111123-12221121111111--------------11-----------------------------111211-11-1---------------------------------1211111112-11--1-1---------1--11---1--11-----------------1111211-----------------------------1-31111-11-1111--1---1--1-11-----211------21-1-1-111111111--111111111111111111111111---11-1-1---1-11111-11-1--1--1---------------11111------1-1---------------3332311-1-1111111111211111111-------------1-----1111111111111112-----------11-----------------------------------------------1- ---------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 332 STR:RPRED 91.5 SQ:SECSTR ########################HTcccTTEEEEEEEEEccEEEEEEccTTccEEEETTTEEEEEETTTEEcccccccccccccTTccEEEEEHHHcEEEEEEEEEcccccEEEEEEEEEEcccEEEEEEEEEEcccccccccccccEEEcccEEEEEEccTTcGGGGGcTTccTTEEEEEETTccccTTcTETTTcTTccTTEEEEcccEEEEEEEETTTTEEEEEEEcccccEEEEcccTTccccTTTcccccccTTccccETTccTTcccccEEEcccccEEEEEEEcccccGGGTTEEEEEETTTTEEEEEEETTEEcEEEEEEcGGGcccEEEEEEcTTTccEEEEEccT####### DISOP:02AL 1-5| PSIPRED cccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEcccEEEEEEEccEEEEEEccccccccccccccccccccccEEEEEEEccEEEEEEEEccccEEEEEEEEEEEcccccccccEEEEEcccccccccccEEEEEcccEEEEEEcccccccccccccccccEEEEEcccccccccccccccccccccEEEEEEccccEEEEEEccccEEEEEEEcccccEEEEEEEcccccccEEEEccccccccccccccccccccccHHEEccccccccEEEEEccccHHHcccEEEEEEcccEEEEEEEccccEEEEEEEcccccccEEEEEEcccccEEEEEEcccEEEEEcc //