[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Candidatus Pelagibacter ubique HTCC1062 (pubi0)
Gene : yrbC
DDBJ      :yrbC         hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:197 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  8->90 2avnA1  c.66.1.41 * 2e-04 28.0 %
:RPS:PFM   44->196 PF05494 * Tol_Tol_Ttg2 4e-12 28.7 %
:HMM:PFM   31->194 PF05494 * Tol_Tol_Ttg2 2.1e-34 26.9 160/170  
:HMM:PFM   6->38 PF09877 * DUF2104 0.001 21.2 33/100  
:BLT:SWISS 63->196 YRBC_SHIFL 6e-08 25.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ20861.1 GT:GENE yrbC GT:PRODUCT hypothetical protein GT:DATABASE GIB00256CH01 GT:ORG pubi0 GB:ACCESSION GIB00256CH01 GB:LOCATION 41060..41653 GB:FROM 41060 GB:TO 41653 GB:DIRECTION + GB:GENE yrbC GB:PRODUCT hypothetical protein GB:NOTE Ttg2 Family, yrbC similar to toluene tolerance protein GB:PROTEIN_ID AAZ20861.1 GB:DB_XREF GI:71061858 GB:GENE:GENE yrbC LENGTH 197 SQ:AASEQ MRLKKFLIFTFVIINFVGINQSYSIEPDVFVQSTVNRASEALNNKYSKEEKIEKLKQIASETVDINGIGYYTLGAYRKNISDNEINQYEMLFEQYFLKSFSSRLAEYSNPEIEVVSKEKLNENYTMVSSILVGTEQRPEVKIDWRIYTKNPENPLIRDLIIEGLSLARTQKEEFSSIIQSKDGDINALFSILKEFIK GT:EXON 1|1-197:0| BL:SWS:NREP 1 BL:SWS:REP 63->196|YRBC_SHIFL|6e-08|25.6|133/211| RP:PFM:NREP 1 RP:PFM:REP 44->196|PF05494|4e-12|28.7|150/169|Tol_Tol_Ttg2| HM:PFM:NREP 2 HM:PFM:REP 31->194|PF05494|2.1e-34|26.9|160/170|Tol_Tol_Ttg2| HM:PFM:REP 6->38|PF09877|0.001|21.2|33/100|DUF2104| RP:SCP:NREP 1 RP:SCP:REP 8->90|2avnA1|2e-04|28.0|82/246|c.66.1.41| OP:NHOMO 42 OP:NHOMOORG 41 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------------------1---------------2------------111111111111111-------------1111111111111----1-------------------------------------------------------------------------------------------------1-------------11-------------------------1----1----------11--------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 44-49, 115-124| PSIPRED ccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEEcccccEEEEEEEccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcc //