[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rickettsia conorii str. Malish 7 (rcon0)
Gene : AAL02990.1
DDBJ      :             unknown
Swiss-Prot:             

Homologs  Archaea  61/68 : Bacteria  664/915 : Eukaryota  173/199 : Viruses  1/175   --->[See Alignment]
d.43.2
:312 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   61->166 2rpbA PDBj 3e-13 34.0 %
:RPS:PDB   51->222 3bk6A PDBj 7e-29 33.5 %
:RPS:SCOP  52->181 1winA  d.43.2.1 * 5e-23 16.3 %
:HMM:SCOP  49->183 1winA_ d.43.2.1 * 8.5e-40 35.1 %
:RPS:PFM   22->195 PF01145 * Band_7 6e-22 33.5 %
:HMM:PFM   21->202 PF01145 * Band_7 1.9e-30 24.6 171/179  
:BLT:SWISS 19->309 YH77_SCHPO 5e-79 49.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL02990.1 GT:GENE AAL02990.1 GT:PRODUCT unknown GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(447148..448086) GB:FROM 447148 GB:TO 448086 GB:DIRECTION - GB:PRODUCT unknown GB:PROTEIN_ID AAL02990.1 GB:DB_XREF GI:15619524 LENGTH 312 SQ:AASEQ MEYALLIFSIIAILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPVIQRVAYKHTLKEEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGKLPLDRTFEERETLNVAIVAAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAERQKRAQILESEGNRQAKINHAEGEKAQIVLNSEASYTDQVNRAKGEAEAIGLVATATANSIEIVATAVQKTGGSDAVALKIAEQYISAFGNLAKDTNTVILPANLSEPSSFITEALTIFNQLKASSSGTKIDK GT:EXON 1|1-312:0| BL:SWS:NREP 1 BL:SWS:REP 19->309|YH77_SCHPO|5e-79|49.1|291/354| TM:NTM 1 TM:REGION 3->25| SEG 5->17|llifsiiailvii| SEG 136->149|nvaivaainqaain| BL:PDB:NREP 1 BL:PDB:REP 61->166|2rpbA|3e-13|34.0|106/113| RP:PDB:NREP 1 RP:PDB:REP 51->222|3bk6A|7e-29|33.5|167/170| RP:PFM:NREP 1 RP:PFM:REP 22->195|PF01145|6e-22|33.5|173/183|Band_7| HM:PFM:NREP 1 HM:PFM:REP 21->202|PF01145|1.9e-30|24.6|171/179|Band_7| RP:SCP:NREP 1 RP:SCP:REP 52->181|1winA|5e-23|16.3|129/143|d.43.2.1| HM:SCP:REP 49->183|1winA_|8.5e-40|35.1|134/0|d.43.2.1|1/1|Band 7/SPFH domain| OP:NHOMO 1575 OP:NHOMOORG 899 OP:PATTERN 111-2111111111111112211111111121--211111111111112111112122221111---- 1121211111111112211-11111211111-23331333121-11111--1112111--222211323311111111-162211111------11---111112--13----------------21111111111111111111111131111111----1111112222-1-----2----1-1--2211--111111111111111------111--------------1---------------------1--11-111111--111-11111111111111111111111111111111111111111111---11111-1111111122121-111111121-----1-1-----2221---11111-1-1111-----1-2111111111111111111111---1--2-1221-111121211222211211111111111--------211--22-----------111111111111111-----11-1-122123332321111122222222122232222--222111111222212121211111111111111122221-1322222111-3221112312222211211--1-------1--------1--111111-212111232222323222232332322-11112------22111112222222222-22222222222222222222221122122212222222222122121222221222222222222--2211111111111112---111-----1111111111111111222232122333321111----1---11112111112221122121222222222--1-222222--------3-1--------------------1----2211112111--- 11--461-531-22222222222222222222222212221222221222222222222222222----2--222------2222211-22122131-111-1335-14248C4475-323442662436P4-447333442334-424242242433448C9424173368B341111G---1136A92934231113 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 168 STR:RPRED 53.8 SQ:SECSTR ##################################################ccccc#cccccccEEEEEEEEEEEcTTccEEEEEEEEEEEEccHHHHHHccccHHHHHHHHHHHHHHHHHHTccHHHHHHcHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEEEccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT###HHHHHHHHHHHHHcTTHHHHHHT########################################################################################## DISOP:02AL 281-312| PSIPRED cHHHHHHHHHHHHHHHHccEEEEcHHEEEEEEEccEEEEEEccccEEEcccEEEEEEEEEEEEEEEEccccEEEEccccEEEEEEEEEEEEccHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHHHHHcccccccc //