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Rickettsia conorii str. Malish 7 (rcon0)
Gene : AAL02993.1
DDBJ      :             unknown
Swiss-Prot:RUVX_RICCN   RecName: Full=Putative Holliday junction resolvase;         EC=3.1.-.-;

Homologs  Archaea  0/68 : Bacteria  633/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:154 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->149 1ovqA PDBj 2e-11 27.5 %
:RPS:SCOP  19->152 1vhxA  c.55.3.8 * 9e-38 33.6 %
:HMM:SCOP  15->152 1nu0A_ c.55.3.8 * 7.4e-36 39.9 %
:RPS:PFM   19->150 PF03652 * UPF0081 3e-24 39.4 %
:HMM:PFM   19->150 PF03652 * UPF0081 9e-42 40.9 132/135  
:BLT:SWISS 1->154 RUVX_RICCN 2e-82 100.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL02993.1 GT:GENE AAL02993.1 GT:PRODUCT unknown GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 450062..450526 GB:FROM 450062 GB:TO 450526 GB:DIRECTION + GB:PRODUCT unknown GB:PROTEIN_ID AAL02993.1 GB:DB_XREF GI:15619527 LENGTH 154 SQ:AASEQ MIIKNLQEFYRLLIPNVPLIAIDYGNKKLGIALSNQERSIAMPLNTITEINKKIVITSLLNIIEKYKVCGVIIGLPIDMSGAVTEQTNIVMKFAEELAKSINLPIYLQDERLTTKAANNLLKSFGVKRKDRNNNDDAVAASMILETVLDSIKNI GT:EXON 1|1-154:0| SW:ID RUVX_RICCN SW:DE RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; SW:GN OrderedLocusNames=RC0455; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA recombination;DNA repair; Hydrolase; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->154|RUVX_RICCN|2e-82|100.0|154/154| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006310|"GO:DNA recombination"|DNA recombination| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| TM:NTM 2 TM:REGION 5->26| TM:REGION 67->89| BL:PDB:NREP 1 BL:PDB:REP 19->149|1ovqA|2e-11|27.5|131/138| RP:PFM:NREP 1 RP:PFM:REP 19->150|PF03652|3e-24|39.4|132/134|UPF0081| HM:PFM:NREP 1 HM:PFM:REP 19->150|PF03652|9e-42|40.9|132/135|UPF0081| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF03652|IPR005227| GO:PFM GO:0006281|"GO:DNA repair"|PF03652|IPR005227| GO:PFM GO:0006310|"GO:DNA recombination"|PF03652|IPR005227| GO:PFM GO:0006974|"GO:response to DNA damage stimulus"|PF03652|IPR005227| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF03652|IPR005227| RP:SCP:NREP 1 RP:SCP:REP 19->152|1vhxA|9e-38|33.6|134/140|c.55.3.8| HM:SCP:REP 15->152|1nu0A_|7.4e-36|39.9|138/0|c.55.3.8|1/1|Ribonuclease H-like| OP:NHOMO 640 OP:NHOMOORG 639 OP:PATTERN -------------------------------------------------------------------- 111--111111111---11-1---1-111111----11---11--1-1-1111--1-------1---111--------1-11--1111111111--1---111--1-1-11111111111111111111-1--1-11111111111-111---1111---1--1-111111----1------1-----11-11111111111111111111111111111111111111111111111111111111111111-1111111111111111-11111111111-111111-111-11111111111111111111111111111-1111111111111111111111111111111111111111111111---1-1111111111111111111111111111111111-111111111111111111-111111-1111111111111111111111--1-11111111111--111111111111111-1111111-1----1111111-11111111111111111----1111--------------11111111111111111-11-----11---1--11---------11111-1--------------------------111111-1111-11111111111111111111-------1--111-1-11111111111111-1111111111111111111--------1111111111111111-1111111-1111111111111---1----11111-1111111-1111111111--------111--1111111111111-111111111111-------------1------------------1----------------1--1----1111--111111-1------1111-1-11-1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-1-1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 133 STR:RPRED 86.4 SQ:SECSTR ##################EEEEEEETTEEEEEEEETTTTEEEEEccccccTTcccHHHHHHHHHHTcEEEEEEcccccccccccTTHHHHHHHHHHHHHHHTccEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHTc### DISOP:02AL 122-133| PSIPRED cccccHHHHHHHHcccccEEEEEccccEEEEEEEccccccccccEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcc //