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Rickettsia conorii str. Malish 7 (rcon0)
Gene : AAL03105.1
DDBJ      :             probable RND efflux transporter-like protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  573/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.35.1
:170 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->105 2v50E PDBj 1e-11 29.5 %
:RPS:PDB   1->44 3d9bA PDBj 3e-07 18.2 %
:RPS:SCOP  1->105 1iwgA7  f.35.1.1 * 3e-16 27.6 %
:HMM:SCOP  1->105 1iwgA7 f.35.1.1 * 1.6e-16 30.5 %
:RPS:PFM   1->111 PF00873 * ACR_tran 5e-22 39.6 %
:HMM:PFM   1->169 PF00873 * ACR_tran 7.7e-39 34.2 149/1021  
:BLT:SWISS 1->160 MDTB_CITK8 1e-30 47.9 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03105.1 GT:GENE AAL03105.1 GT:PRODUCT probable RND efflux transporter-like protein GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(558725..559237) GB:FROM 558725 GB:TO 559237 GB:DIRECTION - GB:PRODUCT probable RND efflux transporter-like protein GB:PROTEIN_ID AAL03105.1 GB:DB_XREF GI:15619648 LENGTH 170 SQ:AASEQ MSLMALTLAMSFVVDDAIVVLENITRHMGKGESKIAGCINGTKEIGFTIVSRTLSLMTIFITILFMSGILGKLLHELAIVITTSILLSGVISITVTPMLCNVFLRDRHCEERSDEALSGQPTEIATAPLTPRNNDLPLTEKAFEYVKQKYGSSLTTVVEHSKTTMLIFFS GT:EXON 1|1-170:0| BL:SWS:NREP 1 BL:SWS:REP 1->160|MDTB_CITK8|1e-30|47.9|140/1040| TM:NTM 3 TM:REGION 3->25| TM:REGION 46->68| TM:REGION 80->102| BL:PDB:NREP 1 BL:PDB:REP 1->105|2v50E|1e-11|29.5|105/1012| RP:PDB:NREP 1 RP:PDB:REP 1->44|3d9bA|3e-07|18.2|44/1045| RP:PFM:NREP 1 RP:PFM:REP 1->111|PF00873|5e-22|39.6|111/1014|ACR_tran| HM:PFM:NREP 1 HM:PFM:REP 1->169|PF00873|7.7e-39|34.2|149/1021|ACR_tran| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00873|IPR001036| GO:PFM GO:0006810|"GO:transport"|PF00873|IPR001036| GO:PFM GO:0016020|"GO:membrane"|PF00873|IPR001036| RP:SCP:NREP 1 RP:SCP:REP 1->105|1iwgA7|3e-16|27.6|105/199|f.35.1.1| HM:SCP:REP 1->105|1iwgA7|1.6e-16|30.5|105/200|f.35.1.1|1/1|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 1689 OP:NHOMOORG 578 OP:PATTERN -------------------------------------------------------------------- 32A-------------------------------------------1--1--111-11------------1-------------2--14564-423----1412-95723--------------12-221-1122-111111--1-222122111--1111-----21151-------------------111-22222222222222211--212211-12122------2-111111111111111111-1-----------------------------------------------------------------------61-3------------111--------1-13-112-1111-1-----2-4323-----11137B7996697A7622232331212-67A57A57234-76655444442467131--33433--12222222224433313------------1-22122111321----112112464553444435222333865555455564554-244523312643345244243344-------22524253422222344332-23-4336255535341441---1111112-1122121323144522224251343446664477446457B763---2332------23232363333334333-3333333333333333333222342353323333333233333533121331-222222221222---13433324335-4411111111111111113333327122548888545743644335511111111111444333333546658435334552222--33112333---1-11------------------------------1--------441 -------------1------------------------------------------------------------------------------------------------------------------------------------------------3----1------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 105 STR:RPRED 61.8 SQ:SECSTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHcc################################################################# DISOP:02AL 107-118| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEc //