[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rickettsia conorii str. Malish 7 (rcon0)
Gene : AAL03110.1
DDBJ      :             unknown
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  220/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.5.1
:125 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->124 1wp1A PDBj 1e-10 35.8 %
:RPS:PDB   1->123 3d5kA PDBj 9e-20 30.5 %
:RPS:SCOP  1->125 1wp1A  f.5.1.1 * 9e-19 30.8 %
:HMM:SCOP  4->125 1ek9A_ f.5.1.1 * 2.4e-18 32.5 %
:RPS:PFM   55->125 PF02321 * OEP 7e-06 31.0 %
:HMM:PFM   51->125 PF02321 * OEP 2.3e-11 34.7 75/188  
:BLT:SWISS 4->125 OPRJ_PSEAE 5e-12 38.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03110.1 GT:GENE AAL03110.1 GT:PRODUCT unknown GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(561639..562016) GB:FROM 561639 GB:TO 562016 GB:DIRECTION - GB:PRODUCT unknown GB:PROTEIN_ID AAL03110.1 GB:DB_XREF GI:15619653 LENGTH 125 SQ:AASEQ MPPLKQQRHEQETTLKILVGRIPENIVNGLIYRNKPIDYFPALPVLPKILPSELLEQRPDIKAAEQNLLAADVNLKTIKATYFPQISLTGLLGFGSNKLNTLFTNSAETWQVDGNIAGPIFDFGK GT:EXON 1|1-125:0| BL:SWS:NREP 1 BL:SWS:REP 4->125|OPRJ_PSEAE|5e-12|38.5|117/479| BL:PDB:NREP 1 BL:PDB:REP 10->124|1wp1A|1e-10|35.8|109/456| RP:PDB:NREP 1 RP:PDB:REP 1->123|3d5kA|9e-20|30.5|118/454| RP:PFM:NREP 1 RP:PFM:REP 55->125|PF02321|7e-06|31.0|71/189|OEP| HM:PFM:NREP 1 HM:PFM:REP 51->125|PF02321|2.3e-11|34.7|75/188|OEP| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF02321|IPR003423| GO:PFM GO:0006810|"GO:transport"|PF02321|IPR003423| RP:SCP:NREP 1 RP:SCP:REP 1->125|1wp1A|9e-19|30.8|120/456|f.5.1.1| HM:SCP:REP 4->125|1ek9A_|2.4e-18|32.5|117/428|f.5.1.1|1/1|Outer membrane efflux proteins (OEP)| OP:NHOMO 389 OP:NHOMOORG 221 OP:PATTERN -------------------------------------------------------------------- 222---------------------------------------------------------------------------------1--11123-1-------31--4---1--------------3----2--11--------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------121122------1-2223-112121-------------------1--1--------------22------------11111111-333---2-------------111-11-------------112311-22555632323333463333137-32538-1342-212-622-2-223-11213111-11--12--1-1211-1-1--1111---1--34411-1--13-1-111111-1----------2---11111-2----1---------111------1-----1--------11----1-111-111---1---111-1-11-------2221-----------------------1---------------------2-----2121--------------------22212121112-22132222-----2111111111111---------------11--------------------------------------------------------------------2-1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 97.6 SQ:SECSTR HHHHHHHHHHHHHHHHHHHTccccTTcccc##cccccTTcccccccccccGGGHHHHcHHHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEEEEEEcccTTcccTTcEEEEEEEEEEccccccT# PSIPRED ccHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccHHHHHHHcccccHHHHHHHcHHHHHHHHHHHHHHccHHHHHHHHccEEEEEEEEEEccccHHHHccccccEEEEEEEEEEcHHcccc //