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Rickettsia conorii str. Malish 7 (rcon0)
Gene : AAL03206.1
DDBJ      :             unknown
Swiss-Prot:Y668_RICCN   RecName: Full=Uncharacterized HTH-type transcriptional regulator RC0668;

Homologs  Archaea  0/68 : Bacteria  108/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.35.1
:125 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->81 2b5aA PDBj 4e-05 28.8 %
:RPS:PDB   9->79 2b5aB PDBj 3e-11 26.8 %
:RPS:SCOP  10->85 1x57A1  a.35.1.12 * 1e-11 23.7 %
:HMM:SCOP  5->94 1rioA_ a.35.1.2 * 5.7e-17 31.1 %
:HMM:PFM   19->73 PF01381 * HTH_3 2.3e-16 29.1 55/55  
:HMM:PFM   63->117 PF09053 * CagZ 0.00072 28.3 53/199  
:BLT:SWISS 1->125 Y668_RICCN 3e-68 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03206.1 GT:GENE AAL03206.1 GT:PRODUCT unknown GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(651429..651806) GB:FROM 651429 GB:TO 651806 GB:DIRECTION - GB:PRODUCT unknown GB:PROTEIN_ID AAL03206.1 GB:DB_XREF GI:15619757 LENGTH 125 SQ:AASEQ MGRKNDIIQKIDSFIGKKIYSLRLAKGLSRQQLAEVIDVTHQQLQKYEKAINRISVGRLVLIAEALDRNIDYFFEGLEEANKPQPVHTQHQRMCIEVSRNFMKINSTEEQQAVNNLVKCLAGKKN GT:EXON 1|1-125:0| SW:ID Y668_RICCN SW:DE RecName: Full=Uncharacterized HTH-type transcriptional regulator RC0668; SW:GN OrderedLocusNames=RC0668; SW:KW Complete proteome; DNA-binding; Transcription;Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->125|Y668_RICCN|3e-68|100.0|125/125| GO:SWS:NREP 3 GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| BL:PDB:NREP 1 BL:PDB:REP 16->81|2b5aA|4e-05|28.8|66/77| RP:PDB:NREP 1 RP:PDB:REP 9->79|2b5aB|3e-11|26.8|71/75| HM:PFM:NREP 2 HM:PFM:REP 19->73|PF01381|2.3e-16|29.1|55/55|HTH_3| HM:PFM:REP 63->117|PF09053|0.00072|28.3|53/199|CagZ| RP:SCP:NREP 1 RP:SCP:REP 10->85|1x57A1|1e-11|23.7|76/78|a.35.1.12| HM:SCP:REP 5->94|1rioA_|5.7e-17|31.1|90/0|a.35.1.2|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 195 OP:NHOMOORG 109 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-83331941C-12221111111111111111111-211212431211211246534332--23111111112121111111111111433111-----11221111112111111----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------- STR:NPRED 117 STR:RPRED 93.6 SQ:SECSTR ##HTTcccHHHHHHHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHTcccccHHHHHHHHHHTTccHHHHHHHHHccccHHHHTcHHHHHHHHccccHHHHHHHHHHccTTcHHHH###### DISOP:02AL 1-9, 83-88, 122-125| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccc //