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Rickettsia conorii str. Malish 7 (rcon0)
Gene : capM2
DDBJ      :capM2        capM protein
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  576/915 : Eukaryota  87/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:338 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   112->328 2jjmA PDBj 2e-10 21.9 %
:RPS:PDB   1->336 3c48A PDBj 4e-36 17.6 %
:RPS:SCOP  11->335 2iv7A1  c.87.1.8 * 3e-32 17.9 %
:HMM:SCOP  1->336 2bisA1 c.87.1.8 * 2.1e-61 27.2 %
:RPS:PFM   161->303 PF00534 * Glycos_transf_1 5e-23 38.3 %
:HMM:PFM   151->314 PF00534 * Glycos_transf_1 1.5e-46 37.2 164/172  
:HMM:PFM   67->125 PF06258 * DUF1022 0.00077 29.8 57/312  
:BLT:SWISS 1->336 LPSE_RHIME 4e-24 26.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03113.1 GT:GENE capM2 GT:PRODUCT capM protein GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(562945..563961) GB:FROM 562945 GB:TO 563961 GB:DIRECTION - GB:GENE capM2 GB:PRODUCT capM protein GB:PROTEIN_ID AAL03113.1 GB:DB_XREF GI:15619656 GB:GENE:GENE capM2 LENGTH 338 SQ:AASEQ MKILNIMLSRDLGGIQQAFLDYSTALEMQKIEIINITSYKAKINSFLHKQSLKLPNIVPFDLLSVLIFKYIIHKTKPDIIIAHGNRAINFSKFAKSQNIKLIGIAHNYSLKGLRKCDFVIALTHHMKEFLLKNHFAESRICILPNMINIAKDFIPNKTYRKPVVIGVLARFVAKKGVDVFIKAIKILKEKKYDLHAVIGGSGEEKDNLIALAHKLNLQDQISFTGWVNDRDKFFKQIDIFCLPSLHEPFGIIVLEAMEASMPIVSTDTEGPTAILNDMQDGLICKAGSAEDLAAKIVYLIENPIKAKEFSKNAYLTLKQNYEIKVVSEKLQHILESFR GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 1->336|LPSE_RHIME|4e-24|26.1|329/340| BL:PDB:NREP 1 BL:PDB:REP 112->328|2jjmA|2e-10|21.9|210/359| RP:PDB:NREP 1 RP:PDB:REP 1->336|3c48A|4e-36|17.6|335/399| RP:PFM:NREP 1 RP:PFM:REP 161->303|PF00534|5e-23|38.3|141/165|Glycos_transf_1| HM:PFM:NREP 2 HM:PFM:REP 151->314|PF00534|1.5e-46|37.2|164/172|Glycos_transf_1| HM:PFM:REP 67->125|PF06258|0.00077|29.8|57/312|DUF1022| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 11->335|2iv7A1|3e-32|17.9|324/370|c.87.1.8| HM:SCP:REP 1->336|2bisA1|2.1e-61|27.2|335/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 1560 OP:NHOMOORG 712 OP:PATTERN 22-----1-------13411-1-14331441-1532341121234194157A7-371436211---11 222-1--1--2--1112----2112------11---1222-1--2--1-1111112111111--2-1532-11111----1-132133669C1922---33435225422---------------2343345267323349222A2B85B474-----111111213BFC3--11--1121--111-1462-15112124-22313541452222446424-341------3522242444442224424421-11-12--222241122241-12----------1--1-----1------------------1121-111131-53444554515222334513-16-13123322647-634322423-12331121------112311-11-12--11--11111-11-111231---133111411133-111--1-1-1112-111111111--21121------------11221111111111-2-2----3-111411122--1111116-1111--1151122-----1--1311111-2-132-2-132232222263-6-32433241153333221223425--1-225635555111122---------32-111--2155342411--1---11------12-12---5113---------1214-----2------1----------------11-11-4311--2-2-1-1-2122-3-11----3---------------1-22222121252422-1-2-1-11111---2--1111-133-1111232-1-1-2-112222221222-2241111114314411--------1111--21222222--------2-1-------------------------332112122-222 1122-11-11--111--------------11-----------------1-------------111-----1--11-----1111-1-1-121-1111111--121111--21-11-1--11-11---31131-11-----------111-1--1-11111121211-111-1-211--------------1-211-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 100.0 SQ:SECSTR cEEEEETccTTcccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEccccGGGGGGGHHHHHHHHHHHHHHHTccccEEEEEHHHHHHHHHHHHTccEEEEcccHHHHHHHHccEEEEccHHHHHHHHHHHccGGGEEEccccccTTHHHHHTTcccccEEEEEEccccGGGcHHHHHHHHHHHHHHcTTccEEEEEEcccccHHHHHHHHTTcTTTEEEEccccHHHHHHHHccEEEEccccccccHHHHHHHHTTccEEEEccTTHHHHcccTTTEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcH PSIPRED cEEEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEcccccccccEEEcccEEEEcccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHccccEEEEEcHHHHHHHHHccEEEEccHHHHHHHHHccccHHHEEEEcccccHHHHccccccccccEEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHccccccEEEEcccccHHHHHHHccEEEEccccccccHHHHHHHHccccEEEEcccccHHHHcccccEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHc //