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Rickettsia conorii str. Malish 7 (rcon0)
Gene : pdhD.1
DDBJ      :pdhD         dihydrolipoamide dehydrogenase precursor
Swiss-Prot:             

Homologs  Archaea  59/68 : Bacteria  867/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.15.12d.87.1
:459 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->451 2f5zI PDBj e-137 56.4 %
:RPS:PDB   2->459 1dxlA PDBj 9e-90 51.2 %
:RPS:SCOP  1->211 1rp0A1  c.3.1.6 * 1e-31 15.2 %
:RPS:SCOP  193->270 1t0qC  d.15.12.1 * 2e-08 7.1 %
:RPS:SCOP  336->459 1aogA3  d.87.1.1 * 1e-39 19.4 %
:HMM:SCOP  1->315 1d5tA1 c.3.1.3 * 7.5e-63 33.1 %
:HMM:SCOP  337->458 1mo9A3 d.87.1.1 * 8.6e-41 54.1 %
:RPS:PFM   5->310 PF07992 * Pyr_redox_2 7e-32 37.5 %
:RPS:PFM   340->448 PF02852 * Pyr_redox_dim 2e-32 59.6 %
:HMM:PFM   5->310 PF07992 * Pyr_redox_2 2.3e-49 41.3 196/202  
:HMM:PFM   340->449 PF02852 * Pyr_redox_dim 1.4e-41 53.6 110/110  
:BLT:SWISS 5->451 DLDH_PIG e-137 57.0 %
:PROS 39->49|PS00076|PYRIDINE_REDOX_1
:PROS 133->162|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03231.1 GT:GENE pdhD.1 GT:PRODUCT dihydrolipoamide dehydrogenase precursor GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 668015..669394 GB:FROM 668015 GB:TO 669394 GB:DIRECTION + GB:GENE pdhD GB:PRODUCT dihydrolipoamide dehydrogenase precursor GB:PROTEIN_ID AAL03231.1 GB:DB_XREF GI:15619784 GB:GENE:GENE pdhD LENGTH 459 SQ:AASEQ MQEFDLVVIGSGPAGYTGSIRAAQLGMKVACIEKSDTLGGTCLNIGCIPSKVLLNSSEKYEVALKHFENIGIIADVKLDLQKMLANKDKVVLDLTQGIESLFAKNKVTRIKGEAKISSSNIVEVNKEQIKAKNILITTGSSVIEIPNIKIDEEFIVSSTGALKLSKVPENLIVVGGGYIGLELGSVWRRLGAKVTVIEYAPSIVPMLDKEIATQFMKLQQKQGIEFKLNTKVLSAEVKSGKVNLTIEEDSKSSVVTSNVVLMAVGRKAYTQNLGLESVGIITDKQGSIEINDRFQTAISNIYAVGDVVKGAMLAHKAEEEAVAAVEIMAGQAGHVNYNLIPSVIYTYPEVASVGETEEQLKEKGINYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGADAGTLIAALTAYMEFGAASEDIARTCHAHPTLSEAIKEAALSVDKRTINM GT:EXON 1|1-459:0| BL:SWS:NREP 1 BL:SWS:REP 5->451|DLDH_PIG|e-137|57.0|447/509| PROS 39->49|PS00076|PYRIDINE_REDOX_1|PDOC00073| PROS 133->162|PS00189|LIPOYL|PDOC00168| SEG 317->326|aeeeavaave| BL:PDB:NREP 1 BL:PDB:REP 5->451|2f5zI|e-137|56.4|447/470| RP:PDB:NREP 1 RP:PDB:REP 2->459|1dxlA|9e-90|51.2|457/467| RP:PFM:NREP 2 RP:PFM:REP 5->310|PF07992|7e-32|37.5|272/275|Pyr_redox_2| RP:PFM:REP 340->448|PF02852|2e-32|59.6|109/110|Pyr_redox_dim| HM:PFM:NREP 2 HM:PFM:REP 5->310|PF07992|2.3e-49|41.3|196/202|Pyr_redox_2| HM:PFM:REP 340->449|PF02852|1.4e-41|53.6|110/110|Pyr_redox_dim| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 3 RP:SCP:REP 1->211|1rp0A1|1e-31|15.2|211/278|c.3.1.6| RP:SCP:REP 193->270|1t0qC|2e-08|7.1|70/83|d.15.12.1| RP:SCP:REP 336->459|1aogA3|1e-39|19.4|124/130|d.87.1.1| HM:SCP:REP 1->315|1d5tA1|7.5e-63|33.1|308/0|c.3.1.3|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 337->458|1mo9A3|8.6e-41|54.1|122/140|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 4212 OP:NHOMOORG 1120 OP:PATTERN 22111174455666551431311341122351231221----12212111332112--1123441--- 4455743455633395655-7811865555536555379735454435444256B4443355B464556421111222--123241114441-322122222273332321111111111111131312221121233312111324443444123322222323245474222222222222422441111535555554535565453644535552426376544444565444444444444445A7954241651322289333455686355653343335544444334444422222222222225554445554324-244444433421533112252--23-1--53-52233113335123216533533333356343343333344454444445-4454654667435554658777773A766554454456533333333533244432232222222112222222222222222215357245457688878644446635555535666485823454343665354523653111333333333463432244223323343331324254351333344-3121-------------------113564457754535722332252422332323341-1764511111143435334445455544-4444455444454343444444443334444454444364445433333343145555555555511331111144542475522222232222222254445355543356675555455564433544445344344565555553444433444422222222231443333--------1-311213-1-32221222232122---2111311121541 4411225-D55-2222222122223222222222212222222221333335482223222222222222222234323322222222-53222222222222425-3C575744465444563FD1E2P*9-A5J3343A4465344435459497576AF36522533766854654*44457998D2B69988679 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 459 STR:RPRED 100.0 SQ:SECSTR cccccEEEEcccHHHHHHHHHHHHHTccEEEEEccccccccHHHHcHHHHHHHHHHHHHHHHHHHHTHHHHTcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHTcEEEEccEEEEETTEEEEccEEEEccEEEEcccEEEcccTTcccccccEEcHHHHTTccccccEEEEccccHHHHHHHHHHHHHTcEEEEEcccccccTTccHHHHHHHHHHHHHccccEEccEEEEEEEcccccEEEEEEEccccEEEEEcEEEccccEEEccTTcccTTTTccccccccccccTTcccccTTEEEccTTccccccHHHHHHHHHHHHHHHTTccccccTTcccEEEccccEEEEEEccHHHHHHTTccEEEEEEEGGGcHHHHHHcccccEEEEEEETTTccEEEEEEEETTHHHHHHHHHHHHHTTccHHHHHTcccccccTTHHHHHHHHHHHcccccc PSIPRED cccccEEEEcccHHHHHHHHHHHHcccEEEEEEccccccEEEcccccccHHHHHHHHHHHHHHHHHHccccEEcccEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccEEEEccEEEEEEEEEEEcccccEEcccccccccEEEEHHHHHcHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccHHHHcccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEEEccccEEEEEcEEEEEccEEccccccccHHcccEEcccccEEEccEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEcccEEEEEccHHHHHHccccEEEEEEEccccccEEccccccEEEEEEEEccccEEEEEEEEEccHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHcccccc //