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Rickettsia conorii str. Malish 7 (rcon0)
Gene : petB
DDBJ      :petB         cytochrome b
Swiss-Prot:CYB_RICCN    RecName: Full=Cytochrome b;

Homologs  Archaea  24/68 : Bacteria  493/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
f.21.1f.32.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->395 2qjpA PDBj e-129 60.6 %
:RPS:PDB   16->366 1be3C PDBj 1e-57 34.3 %
:RPS:SCOP  17->276 1bccC3  f.21.1.2 * 2e-76 53.1 %
:RPS:SCOP  277->392 1bccC2  f.32.1.1 * 2e-33 48.3 %
:HMM:SCOP  14->276 1ezvC3 f.21.1.2 * 1.3e-112 59.8 %
:HMM:SCOP  207->367 1q90D_ f.32.1.1 * 5.6e-61 58.1 %
:RPS:PFM   50->203 PF00033 * Cytochrom_B_N 2e-40 63.3 %
:RPS:PFM   274->375 PF00032 * Cytochrom_B_C 7e-29 61.8 %
:HMM:PFM   274->375 PF00032 * Cytochrom_B_C 2.5e-46 61.8 102/102  
:HMM:PFM   49->217 PF00033 * Cytochrom_B_N 7.1e-17 21.6 134/188  
:BLT:SWISS 1->398 CYB_RICCN 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL02897.1 GT:GENE petB GT:PRODUCT cytochrome b GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 359925..361121 GB:FROM 359925 GB:TO 361121 GB:DIRECTION + GB:GENE petB GB:PRODUCT cytochrome b GB:PROTEIN_ID AAL02897.1 GB:DB_XREF GI:15619423 GB:GENE:GENE petB LENGTH 398 SQ:AASEQ MNEDITPKKPNAIIEWIDYRLPIFAFLKHFSHYQTPKNLNYLWNLGSIAGIALVIQIITGVILAMHYTPHVDHAFDSVERIMRNVNYGWLLRYTHAVGASMFFAAVYLHIARGLYYGSYKAPRELLWHIGIIIFLTMMATAFMGYVLPWGQMSYWGATVITNLFSAIPLIGEFIVTWLWGGFSVDNPTLNRFFSLHYLLPFIIVALVMLHLVALHQHGSNNPKGIDVKSPKDTIPFHPYYTVKDFVGFGVYFIIFAYFIFYEPNYLGHPDNYIPANPLVTPAHIVPEWYFLPFYAILRAMPSKLGGVLLMFGSIFVLFLLPWLDTSKVRSSNYRPIYRMAFWIFMADCLLLGYLGGQPAEEPYITISRFAACYYFFHVLVALPLIGKYEKPLPLPEEL GT:EXON 1|1-398:0| SW:ID CYB_RICCN SW:DE RecName: Full=Cytochrome b; SW:GN Name=petB; Synonyms=cytB; OrderedLocusNames=RC0359; SW:KW Cell membrane; Complete proteome; Electron transport; Heme; Iron;Membrane; Metal-binding; Respiratory chain; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->398|CYB_RICCN|0.0|100.0|398/398| GO:SWS:NREP 7 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0022900|"GO:electron transport chain"|Electron transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0070469|"GO:respiratory chain"|Respiratory chain| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 9 TM:REGION 44->66| TM:REGION 95->117| TM:REGION 125->147| TM:REGION 159->181| TM:REGION 195->216| TM:REGION 239->261| TM:REGION 297->319| TM:REGION 336->358| TM:REGION 365->387| SEG 204->215|valvmlhlvalh| SEG 251->261|yfiifayfify| BL:PDB:NREP 1 BL:PDB:REP 13->395|2qjpA|e-129|60.6|383/428| RP:PDB:NREP 1 RP:PDB:REP 16->366|1be3C|1e-57|34.3|347/379| RP:PFM:NREP 2 RP:PFM:REP 50->203|PF00033|2e-40|63.3|139/172|Cytochrom_B_N| RP:PFM:REP 274->375|PF00032|7e-29|61.8|102/102|Cytochrom_B_C| HM:PFM:NREP 2 HM:PFM:REP 274->375|PF00032|2.5e-46|61.8|102/102|Cytochrom_B_C| HM:PFM:REP 49->217|PF00033|7.1e-17|21.6|134/188|Cytochrom_B_N| GO:PFM:NREP 6 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00033|IPR005797| GO:PFM GO:0016020|"GO:membrane"|PF00033|IPR005797| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00033|IPR005797| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00032|IPR005798| GO:PFM GO:0016020|"GO:membrane"|PF00032|IPR005798| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00032|IPR005798| RP:SCP:NREP 2 RP:SCP:REP 17->276|1bccC3|2e-76|53.1|256/260|f.21.1.2| RP:SCP:REP 277->392|1bccC2|2e-33|48.3|116/119|f.32.1.1| HM:SCP:REP 14->276|1ezvC3|1.3e-112|59.8|261/261|f.21.1.2|1/1|Transmembrane di-heme cytochromes| HM:SCP:REP 207->367|1q90D_|5.6e-61|58.1|155/0|f.32.1.1|1/1|a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)| OP:NHOMO 675 OP:NHOMOORG 574 OP:PATTERN ------3333333333-2------2112122------------------------------1221-11 1-41111111111121111-111111111111111111111-11111111111111111111211111311-----------211111-------------------------------------11111111111--------1-211111111111111111113222211111111111111111----111111111111111111111111111111111------111---------------------------------------------------------------------------------------------------------------------1--2-11---------------11-1111-1--1111111111111111111111111111111111121-111111111111111111111111111222222221111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111---1-----------2221322--1111-1-11111111111111111111111-112211-111111111111111111111111111---1111------1-------------------------------------------------------------------------------------1-----1111111------------------------1111111111111111111------------11111111111111111111111111111111------------------------------------------------------1- -3------1-----1------------1-------1--------11-1------1-1-----2-211---1-1---4----------1-----1---11-1----1------11111-----1-11-1-13--11-----1--11--------1-1---------112--F-13-2-3---1--11228-12------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 388 STR:RPRED 97.5 SQ:SECSTR ##########ccHHHccTTTccHHHHHGGGTccEEEcccccTTcHHHHHHHHHHHHHHHHHHHTTcccccTTTHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGcHHHHHHHHHHHHHHHHHHHHHHHTTTTccHHHHHHHHHHHHHGGGcTTTHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccTTccccccGGGEEETTHHHHHHHHHHHHHHHHHHHHHHHHcTTTccccccccccccccccTTccccHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHcccccccGGGcHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHHHHHHHHTHHHHHHHHcccccccccc DISOP:02AL 1-6, 8-9, 396-398| PSIPRED cccccccccccHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc //