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Rickettsia conorii str. Malish 7 (rcon0)
Gene : recF
DDBJ      :recF         RecF protein
Swiss-Prot:RECF_RICCN   RecName: Full=DNA replication and repair protein recF;

Homologs  Archaea  0/68 : Bacteria  579/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:360 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->345 2o5vA PDBj 5e-17 24.8 %
:RPS:PDB   4->51,281->346 1e69A PDBj 5e-06 31.2 %
:RPS:SCOP  4->162 1f2t.1  c.37.1.12 * 1e-11 14.5 %
:RPS:SCOP  143->342 1w1wA  c.37.1.12 * 5e-05 15.8 %
:HMM:SCOP  4->359 1w1wA_ c.37.1.12 * 3.2e-39 22.9 %
:RPS:PFM   6->106 PF02463 * SMC_N 8e-04 35.8 %
:HMM:PFM   6->346 PF02463 * SMC_N 1.6e-22 26.7 180/220  
:BLT:SWISS 1->360 RECF_RICCN 0.0 100.0 %
:PROS 120->140|PS00617|RECF_1
:PROS 309->327|PS00618|RECF_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL02570.1 GT:GENE recF GT:PRODUCT RecF protein GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(32500..33582) GB:FROM 32500 GB:TO 33582 GB:DIRECTION - GB:GENE recF GB:PRODUCT RecF protein GB:PROTEIN_ID AAL02570.1 GB:DB_XREF GI:15619066 GB:GENE:GENE recF LENGTH 360 SQ:AASEQ MKNIFLHSLNLENYRNFKNLELKTDNTPIILIGENGSGKTNILEAISLFYPGRGLRSAKLANVCKTSEDHCLVKALLQSKLGLAEFTTQFKRSSNRRITEYNESKIANNELSKFTSMVWLTPHMEGIFTSGSSDRRKFLDRIVYNFDPKHAELVSKYEYYMHERNKILVEDRRDDNWLKIIEEKMADISNHIANNRLKTLEFMQQAIDDLENEFPKADLSIDGIVEQKILNGKKNIVSFITAELYQTRSKDKLLGRTSFGVHKSDFLVKHQKKNILAKFCSTGEQKAILIAIILAEMNYAIKLTKIAPILLLDEVFVHLDDKRRQYLIEFLTGLNMQLWVTTTNLEGIDNFATKAQLIKL GT:EXON 1|1-360:0| SW:ID RECF_RICCN SW:DE RecName: Full=DNA replication and repair protein recF; SW:GN Name=recF; OrderedLocusNames=RC0032; SW:KW ATP-binding; Complete proteome; Cytoplasm; DNA damage; DNA repair;DNA replication; DNA-binding; Nucleotide-binding; SOS response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->360|RECF_RICCN|0.0|100.0|360/360| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009432|"GO:SOS response"|SOS response| PROS 120->140|PS00617|RECF_1|PDOC00539| PROS 309->327|PS00618|RECF_2|PDOC00539| BL:PDB:NREP 1 BL:PDB:REP 3->345|2o5vA|5e-17|24.8|327/358| RP:PDB:NREP 1 RP:PDB:REP 4->51,281->346|1e69A|5e-06|31.2|109/263| RP:PFM:NREP 1 RP:PFM:REP 6->106|PF02463|8e-04|35.8|95/536|SMC_N| HM:PFM:NREP 1 HM:PFM:REP 6->346|PF02463|1.6e-22|26.7|180/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 2 RP:SCP:REP 4->162|1f2t.1|1e-11|14.5|159/288|c.37.1.12| RP:SCP:REP 143->342|1w1wA|5e-05|15.8|183/274|c.37.1.12| HM:SCP:REP 4->359|1w1wA_|3.2e-39|22.9|327/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 580 OP:NHOMOORG 579 OP:PATTERN -------------------------------------------------------------------- -----1----------------------------------1--------1111-1---11-----1-111--------11-1------11111111---111111111111111111111----11111111-111--------1111111111111------11-111111-1-111-1111111--12--11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111--11111111111111111111111111111111--111111111111111111111111111111111-11111111111111111111111111111111111111111111111-111111111111111111111111111111111111-11111-----------------------------------------------------------------------1--------------1-11111-------------------------------------11-11111-111111111111111111111--11-11------11--1-11111111111-1111111111111111111111--1111111111111111111-1111111-----------------1-----1111----11111111111-1111111111111-1-11111-1--111--111111111111-11111111111111111-1--1111111---1111111-------1111-------------------------1------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 352 STR:RPRED 97.8 SQ:SECSTR EEccEEEEEEEEccTTccccEEEEcccEEEEEccTTTccTHHHHHHHHTcccEEcccccGGGGccTTcccEEEEEEEEETTEEEEEEEEEETTEHEEEEEETTEEEcGGGcccHccEEEEcTTTTHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHTTcGGTTTTHHHHHHHHHHH#######HHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEccccTTTHHHHHHHTHHHHHTcGGGGHHHHHHHHHHHTccccEEEEEccHHHHHHHHHHHHHHcTTcHHTTTccccEEEEEcccccccHHHHHHHHHHHHHHTcEEEEEcccTTGTTTEEcccHHHH# DISOP:02AL 1-2| PSIPRED cccEEEEEEEEEEEEEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHccccEEEEEEEEEccccEEEEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHEEccccHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHEEEHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHcccHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHcccEEEc //