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Rickettsia conorii str. Malish 7 (rcon0)
Gene : rhlE
DDBJ      :rhlE         ATP-dependent RNA helicase RhlE
Swiss-Prot:             

Homologs  Archaea  54/68 : Bacteria  830/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:414 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->364 2db3A PDBj 2e-60 37.8 %
:RPS:PDB   8->326 1cu1A PDBj 4e-62 13.0 %
:RPS:SCOP  9->204 1fuuA  c.37.1.19 * 6e-43 34.4 %
:RPS:SCOP  214->344 1jr6A  c.37.1.14 * 3e-25 21.1 %
:HMM:SCOP  68->356 1wp9A2 c.37.1.19 * 2.5e-71 38.4 %
:RPS:PFM   29->186 PF00270 * DEAD 2e-39 46.2 %
:RPS:PFM   268->326 PF00271 * Helicase_C 8e-16 52.5 %
:HMM:PFM   27->187 PF00270 * DEAD 1.7e-51 40.0 160/167  
:HMM:PFM   257->333 PF00271 * Helicase_C 9.5e-29 41.6 77/78  
:BLT:SWISS 6->359 CSHA_GEOKA 2e-75 40.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03558.1 GT:GENE rhlE GT:PRODUCT ATP-dependent RNA helicase RhlE GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(945111..946355) GB:FROM 945111 GB:TO 946355 GB:DIRECTION - GB:GENE rhlE GB:PRODUCT ATP-dependent RNA helicase RhlE GB:PROTEIN_ID AAL03558.1 GB:DB_XREF GI:15620136 GB:GENE:GENE rhlE LENGTH 414 SQ:AASEQ MDYIMKNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSFIKNKTTALILVPTRELATQIHSTLNKVTTSYKINSAVLIGGEPMPKQFIQLKKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLEEINKFLPEKRQVLMFSATMPKHIIAVSQKYLNNPVRITVGATNKAAAEIKQESMHVSDKEKFSALTKQLGNREGSVIIFVKTKRSADQLAKMLKYENHTAEAIHGDLSQRQRERVILSFRKSNHRIMVATDVAARGLDIPHTQHVINYDLPMCPEDYLHRIGRTGRAGATGHALSFISPDDVIRWRAIDRLVNKGESTPRSEFRSDKNNRKRSFGKRAGGDGKKFNAFDSSRKRTFDGNSYGNKRKKVS GT:EXON 1|1-414:0| BL:SWS:NREP 1 BL:SWS:REP 6->359|CSHA_GEOKA|2e-75|40.1|354/467| SEG 327->336|grtgragatg| BL:PDB:NREP 1 BL:PDB:REP 26->364|2db3A|2e-60|37.8|339/420| RP:PDB:NREP 1 RP:PDB:REP 8->326|1cu1A|4e-62|13.0|284/645| RP:PFM:NREP 2 RP:PFM:REP 29->186|PF00270|2e-39|46.2|158/167|DEAD| RP:PFM:REP 268->326|PF00271|8e-16|52.5|59/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 27->187|PF00270|1.7e-51|40.0|160/167|DEAD| HM:PFM:REP 257->333|PF00271|9.5e-29|41.6|77/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 9->204|1fuuA|6e-43|34.4|195/215|c.37.1.19| RP:SCP:REP 214->344|1jr6A|3e-25|21.1|123/138|c.37.1.14| HM:SCP:REP 68->356|1wp9A2|2.5e-71|38.4|268/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 10443 OP:NHOMOORG 1083 OP:PATTERN 11-1122222222232-31222-21-----1-1111211111122212-31441---11112221-12 1211333333332332322-23113322222233333555-32333432444433323--4432333564211111111231-11121555616333--6265627A817--------------22212222331211111111112311322----12132131-2333111111211111131111--1124666666665666666434444666222335444444465233333333333333333334333443333333334433333222233333333333333333323333333333333333333333333-534755566557663522534445-2-232117534-1221----1-214-4323322212333333223333333333333333-3333333323223333333333333324333243344325555555536663323------------111111211111112111333324444355555554444445544443455544452444454544575554554443353222222242244574625253214333-444534545333375424--1-------1111111115111522AA8746B689AAEEEEEEDEDDEBDDDEDC1-2222311111154555555555555555-5555555555555555555555554455555555555545445555455554154455664455611452222233333644A323333233343334222222222256676677666666666673222222225ABBB999998BBBB44555555553333232-442233--------21322232---1--12---11121-111121111-1---33 RPMOWVS5*PQKPOTNPPMMOOOPPPONNONNNNMMNPMNMNMNNMOPNOPOOPOPPONPNOONNOOOHPPONOOPQLQQOPNNONNN-MZQPOQTSOPOPMPbdcBS*W*kvkpixWVVPWdUuqT*U**l3vi*RZYSmVahUQaZTTcSOwWgVUZY*wgZWUWjYf*glhTMZWg*fedTauk**P*qYWcWaZb --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 403 STR:RPRED 97.3 SQ:SECSTR ccEccHGEEEEEEEEHHHHHHHHHccccccccccccccccEEEEEEccccccTTTHHHHHHHHHcTTTTccEEEEEccHHHHHHHHHHHHHHTccTTccEEEccTccEEEcccccccccccEEEEEHHHHHHHTcccTTcccEEEEETTTcccHHHHHHHHHHHHHTTTTTccEEEEEEcccTTccccccTTEEEEEcccccccccccccEEcccEEEccHHHcEEETTEEEcGGTcccEEEEEccccHHHHHHHHHHHHTTccEEEEcTTcccccccccccEEEEEcTTHHHHccccccEEEEccEEEEEEEEcccEEEEEEEEcccccccccccEEEEEEccTHHHHHHHHHHHTTcTcccccccccEEccHHHHHHHHHHHHHHTTcHHHHHTTcEEccc########### DISOP:02AL 365-414| PSIPRED ccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEccHHHHHHHHcccEEEcccEEEEEEccHHccccccHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHccccEEEEEccccccccccEEEEEEEccHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEEcccccHHHcccccccEEccccccEEEEEEcHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccccccccccccHHHccc //