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Rickettsia conorii str. Malish 7 (rcon0)
Gene : rplB
DDBJ      :rplB         50S ribosomal protein L2
Swiss-Prot:RL2_RICCN    RecName: Full=50S ribosomal protein L2;

Homologs  Archaea  68/68 : Bacteria  909/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.34.5b.40.4
:273 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   39->250 2gyaA PDBj 6e-78 63.5 %
:RPS:PDB   32->248 3dllA PDBj 1e-89 60.8 %
:RPS:SCOP  6->125 2hgjD2  b.40.4.5 * 4e-32 57.5 %
:RPS:SCOP  127->252 1s72A1  b.34.5.3 * 1e-26 39.7 %
:HMM:SCOP  38->126 1ffkA2 b.40.4.5 * 1.9e-33 64.0 %
:HMM:SCOP  127->268 1ffkA1 b.34.5.3 * 3.1e-61 61.3 %
:RPS:PFM   42->118 PF00181 * Ribosomal_L2 4e-26 71.4 %
:RPS:PFM   124->252 PF03947 * Ribosomal_L2_C 1e-40 64.3 %
:HMM:PFM   124->251 PF03947 * Ribosomal_L2_C 4e-60 65.6 128/130  
:HMM:PFM   42->118 PF00181 * Ribosomal_L2 2.9e-40 67.5 77/77  
:BLT:SWISS 1->273 RL2_RICCN e-152 100.0 %
:PROS 218->229|PS00467|RIBOSOMAL_L2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03541.1 GT:GENE rplB GT:PRODUCT 50S ribosomal protein L2 GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(931396..932217) GB:FROM 931396 GB:TO 932217 GB:DIRECTION - GB:GENE rplB GB:PRODUCT 50S ribosomal protein L2 GB:PROTEIN_ID AAL03541.1 GB:DB_XREF GI:15620118 GB:GENE:GENE rplB LENGTH 273 SQ:AASEQ MALKNFNPITPSLRELVQVDKTSLWKGRPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDGEYSYILAPQKLSVGDRVISSQDADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKDSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGFPTKGKKTRKNKRTSKFIVKKRK GT:EXON 1|1-273:0| SW:ID RL2_RICCN SW:DE RecName: Full=50S ribosomal protein L2; SW:GN Name=rplB; OrderedLocusNames=RC1003; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->273|RL2_RICCN|e-152|100.0|273/273| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 218->229|PS00467|RIBOSOMAL_L2|PDOC00384| SEG 253->266|tkgkktrknkrtsk| BL:PDB:NREP 1 BL:PDB:REP 39->250|2gyaA|6e-78|63.5|211/227| RP:PDB:NREP 1 RP:PDB:REP 32->248|3dllA|1e-89|60.8|217/218| RP:PFM:NREP 2 RP:PFM:REP 42->118|PF00181|4e-26|71.4|77/77|Ribosomal_L2| RP:PFM:REP 124->252|PF03947|1e-40|64.3|129/129|Ribosomal_L2_C| HM:PFM:NREP 2 HM:PFM:REP 124->251|PF03947|4e-60|65.6|128/130|Ribosomal_L2_C| HM:PFM:REP 42->118|PF00181|2.9e-40|67.5|77/77|Ribosomal_L2| GO:PFM:NREP 8 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00181|IPR002171| GO:PFM GO:0005622|"GO:intracellular"|PF00181|IPR002171| GO:PFM GO:0005840|"GO:ribosome"|PF00181|IPR002171| GO:PFM GO:0006412|"GO:translation"|PF00181|IPR002171| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF03947|IPR002171| GO:PFM GO:0005622|"GO:intracellular"|PF03947|IPR002171| GO:PFM GO:0005840|"GO:ribosome"|PF03947|IPR002171| GO:PFM GO:0006412|"GO:translation"|PF03947|IPR002171| RP:SCP:NREP 2 RP:SCP:REP 6->125|2hgjD2|4e-32|57.5|120/122|b.40.4.5| RP:SCP:REP 127->252|1s72A1|1e-26|39.7|126/147|b.34.5.3| HM:SCP:REP 38->126|1ffkA2|1.9e-33|64.0|89/90|b.40.4.5|1/1|Nucleic acid-binding proteins| HM:SCP:REP 127->268|1ffkA1|3.1e-61|61.3|142/0|b.34.5.3|1/1|Translation proteins SH3-like domain| OP:NHOMO 1445 OP:NHOMOORG 1171 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 2211111183212222213122222122222222222412222222222222222221222221322212211331311122221134-23222222222221545113132322232121122342424A3-23411-221223-121-22122233136222231322312233222Q22222646I2631111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 99.3 SQ:SECSTR #cccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccEEcccccccTTTTcccccccccccTTTccccEEEccTTTccEEEcccccccTTcccccccccccccccccccTTccTTccEEcccccccccccccccTTcccccccEETTEEcEEETTTEEEcccTTcccEEccccTTcccccccccTTTTTTTcccccccTTcccTTTcTTccccccccccccccccccccccccccccccccTTTEEEcc# DISOP:02AL 37-46, 233-253| PSIPRED cccEEcccccccccEEEEEEccccEEccccHHHEEccccccccccccEEEEEEcccHHHHccEEEEEEEEccccEEEEEEEEEcccccccEEEEEEccccEEEEEEccccccccEEEEccccccccccEEEHHccccccEEEEEEccccccEEEEEEcccEEEEEEEEccEEEEEEccccEEEEccccEEEEEEEEccccccccHHHHHHHHHcccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEcc //