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Rickettsia conorii str. Malish 7 (rcon0)
Gene : secY
DDBJ      :secY         preprotein translocase secY subunit
Swiss-Prot:SECY_RICCN   RecName: Full=Preprotein translocase subunit secY;

Homologs  Archaea  2/68 : Bacteria  908/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
f.41.1
:433 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->427 3dl8G PDBj 4e-83 40.4 %
:RPS:PDB   31->362 3dl8G PDBj 2e-74 22.2 %
:RPS:SCOP  13->303 1rh5A  f.41.1.1 * 1e-25 18.7 %
:HMM:SCOP  12->418 1rh5A_ f.41.1.1 * 1.6e-117 48.9 %
:RPS:PFM   70->409 PF00344 * SecY 3e-74 53.5 %
:HMM:PFM   70->410 PF00344 * SecY 2.9e-112 50.0 332/341  
:BLT:SWISS 1->433 SECY_RICCN 0.0 100.0 %
:PROS 70->89|PS00755|SECY_1
:PROS 168->185|PS00756|SECY_2
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03524.1 GT:GENE secY GT:PRODUCT preprotein translocase secY subunit GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION complement(923692..924993) GB:FROM 923692 GB:TO 924993 GB:DIRECTION - GB:GENE secY GB:PRODUCT preprotein translocase secY subunit GB:PROTEIN_ID AAL03524.1 GB:DB_XREF GI:15620100 GB:GENE:GENE secY LENGTH 433 SQ:AASEQ MGQNFSKKSGNDLVSRIVFTILILIVCRFGSFIPIPGIDSIALSSVAAQNQSGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLMSVAYKPLENLKKEGEVGKRKVNQLSRYLTVLLASFQAYGVAISLESIVTNTGPVVILAGFFFRITTVITLVVGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAIAVCIGVVVLIAIIIFFERAQRKLLVQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPATLANFSNSNSETMGMLTYYLGHGKPVYILLYVALIMFFSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFLIVVNVVLDTMTQIQTYLFSSKYEGLMKKVKLKN GT:EXON 1|1-433:0| SW:ID SECY_RICCN SW:DE RecName: Full=Preprotein translocase subunit secY; SW:GN Name=secY; OrderedLocusNames=RC0986; SW:KW Cell membrane; Complete proteome; Membrane; Protein transport;Translocation; Transmembrane; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->433|SECY_RICCN|0.0|100.0|433/433| GO:SWS:NREP 6 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0055085|"GO:transmembrane transport"|Translocation| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 70->89|PS00755|SECY_1|PDOC00612| PROS 168->185|PS00756|SECY_2|PDOC00612| TM:NTM 9 TM:REGION 19->41| TM:REGION 70->92| TM:REGION 113->135| TM:REGION 145->167| TM:REGION 181->203| TM:REGION 211->233| TM:REGION 304->326| TM:REGION 361->383| TM:REGION 391->413| BL:PDB:NREP 1 BL:PDB:REP 12->427|3dl8G|4e-83|40.4|399/406| RP:PDB:NREP 1 RP:PDB:REP 31->362|3dl8G|2e-74|22.2|315/406| RP:PFM:NREP 1 RP:PFM:REP 70->409|PF00344|3e-74|53.5|333/337|SecY| HM:PFM:NREP 1 HM:PFM:REP 70->410|PF00344|2.9e-112|50.0|332/341|SecY| GO:PFM:NREP 3 GO:PFM GO:0015031|"GO:protein transport"|PF00344|IPR002208| GO:PFM GO:0015450|"GO:P-P-bond-hydrolysis-driven protein transmembrane transporter activity"|PF00344|IPR002208| GO:PFM GO:0016020|"GO:membrane"|PF00344|IPR002208| RP:SCP:NREP 1 RP:SCP:REP 13->303|1rh5A|1e-25|18.7|262/410|f.41.1.1| HM:SCP:REP 12->418|1rh5A_|1.6e-117|48.9|372/422|f.41.1.1|1/1|Preprotein translocase SecY subunit| OP:NHOMO 1014 OP:NHOMOORG 927 OP:PATTERN ---------------------------------1------------------------------1--- 1111211111111111111-111111111111111111111111111111111211111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222122222222211111122211111111111111112222222222222212221111111111111111111121111112221111211211212221211111111111111212111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11122L222121234-23------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 96.1 SQ:SECSTR ###########ccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccGGGTcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTHHHHHHHHHHHHHTTTTccccccccccccccTHHHHHHHHHHHHHHHHHTccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccTcccccccTTTTTTTTTHHHHHHHHHHHHHHHHHHHHTcTTHHHHHHHTcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccTTHHHHHHHHHHHHHHHHHHHHHcccccccTTcc###### DISOP:02AL 1-6, 97-110, 247-257, 430-433| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccHHHccccEEcccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHEEcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //