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Rickettsia conorii str. Malish 7 (rcon0)
Gene : serS
DDBJ      :serS         seryl-tRNA synthetase
Swiss-Prot:SYS_RICCN    RecName: Full=Seryl-tRNA synthetase;         EC=6.1.1.11;AltName: Full=Seryl-tRNA(Ser/Sec) synthetase;AltName: Full=Serine--tRNA ligase;         Short=SerRS;

Homologs  Archaea  55/68 : Bacteria  910/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
a.2.7d.104.1
:425 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->415 2dq3A PDBj 3e-93 48.9 %
:RPS:PDB   1->420 2dq0A PDBj 2e-88 37.8 %
:RPS:SCOP  149->425 1atiA2  d.104.1.1 * 2e-51 18.9 %
:HMM:SCOP  1->112 1setA1 a.2.7.1 * 2.3e-24 40.4 %
:HMM:SCOP  113->421 1setA2 d.104.1.1 * 5.3e-87 40.0 %
:RPS:PFM   1->82 PF02403 * Seryl_tRNA_N 2e-05 35.8 %
:RPS:PFM   171->335 PF00587 * tRNA-synt_2b 2e-15 34.4 %
:HMM:PFM   171->340 PF00587 * tRNA-synt_2b 7.4e-39 25.3 166/173  
:HMM:PFM   1->107 PF02403 * Seryl_tRNA_N 3.1e-22 40.6 106/108  
:BLT:SWISS 1->425 SYS_RICCN 0.0 100.0 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03754.1 GT:GENE serS GT:PRODUCT seryl-tRNA synthetase GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 1115909..1117186 GB:FROM 1115909 GB:TO 1117186 GB:DIRECTION + GB:GENE serS GB:PRODUCT seryl-tRNA synthetase GB:PROTEIN_ID AAL03754.1 GB:DB_XREF GI:15620347 GB:GENE:GENE serS LENGTH 425 SQ:AASEQ MLNIKWIRENKELFDEKLSQRFIEPMSSKIAMLDGEKRKITSLIQEFQHARKVKSKILGNMASKSGEEFEGLQRDVKHINEKLEALEQDLNNNNELNELLNMFPNIPDDEVPYGMDESMNKLVRTYGETNPNALNKQHFELGIKLNLMDFEQTAKISGTRFVTLKGDLAKLERALINFMIDVHTKEWDFFEISPPVLVRDNAMYNAGQLPKFAEESFATTNGYRLIPTAEVSLVNMVADTIIPREKLPIRYVAYTPCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESTNEHEYITNASETILQKLNLPYRVMLLCTGDMGFAAKKTYDIEVWLPGQKQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTMVAILENYQNEDGSITIPDVLINYMGGLQKIIAYSE GT:EXON 1|1-425:0| SW:ID SYS_RICCN SW:DE RecName: Full=Seryl-tRNA synthetase; EC=6.1.1.11;AltName: Full=Seryl-tRNA(Ser/Sec) synthetase;AltName: Full=Serine--tRNA ligase; Short=SerRS; SW:GN Name=serS; OrderedLocusNames=RC1216; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->425|SYS_RICCN|0.0|100.0|425/425| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| COIL:NAA 34 COIL:NSEG 1 COIL:REGION 62->95| SEG 83->101|lealeqdlnnnnelnelln| BL:PDB:NREP 1 BL:PDB:REP 2->415|2dq3A|3e-93|48.9|411/422| RP:PDB:NREP 1 RP:PDB:REP 1->420|2dq0A|2e-88|37.8|418/447| RP:PFM:NREP 2 RP:PFM:REP 1->82|PF02403|2e-05|35.8|81/107|Seryl_tRNA_N| RP:PFM:REP 171->335|PF00587|2e-15|34.4|160/170|tRNA-synt_2b| HM:PFM:NREP 2 HM:PFM:REP 171->340|PF00587|7.4e-39|25.3|166/173|tRNA-synt_2b| HM:PFM:REP 1->107|PF02403|3.1e-22|40.6|106/108|Seryl_tRNA_N| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02403|IPR015866| GO:PFM GO:0004828|"GO:serine-tRNA ligase activity"|PF02403|IPR015866| GO:PFM GO:0005524|"GO:ATP binding"|PF02403|IPR015866| GO:PFM GO:0005737|"GO:cytoplasm"|PF02403|IPR015866| GO:PFM GO:0006412|"GO:translation"|PF02403|IPR015866| GO:PFM GO:0006434|"GO:seryl-tRNA aminoacylation"|PF02403|IPR015866| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| RP:SCP:NREP 1 RP:SCP:REP 149->425|1atiA2|2e-51|18.9|259/326|d.104.1.1| HM:SCP:REP 1->112|1setA1|2.3e-24|40.4|109/110|a.2.7.1|1/1|tRNA-binding arm| HM:SCP:REP 113->421|1setA2|5.3e-87|40.0|305/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1443 OP:NHOMOORG 1159 OP:PATTERN 1111111111111111111111111111111111---------1-111--111-11111111111111 1111111111111111111-11111111111111111111111211111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111221111111211111111111111211111111111111111111211111111112211111111111111111111111111111111111111111111111111111111111121222222212112111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111-11111111111111111111111111111111 2111222141112222222222222222222222222222222222322223232222222222222212222222222122222222-24222222222222334122253224312122-2244-225M2-2351122322211221122132111322423221221-22122222N2222243742422242222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 425 STR:RPRED 100.0 SQ:SECSTR cccHHHHHHcHHHHHHHHHHHTcGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGHHTccccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccTTccccccGGGcEEEEEEccEEEccccccHHHHHHHTTcEEcHHHHHHTcTTccEEcHHHHHHHHHHHHHHHHHHTHHTTcEEEccccEEcHHHHHTTccTTHHHHTccccTTccEEcccTHHHHHHTTTTEEEETTTccEEEEEEEEEEcccTTcccccccccccccEEEEEEEEEEEcTTTHHHHHHHHHHHHHHHHHHTTccEEEEEccGGGccccccEEEEEEEEETTTTEEEEEEEEEEcTTTTHHHHTEEEEccTTcccEEcEEEEEEEEEHHHHHHHHHHHcccTTccEEccGGGHHHHcccEEccccEc DISOP:02AL 51-78| PSIPRED cccHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccccccccHHHHHHHccccccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHcccccccHHHccEEcccccccccccHHHHHHHHHccccHHHccEEEEEEEEEEEEccccccccccccEEEHEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEEEEEEcccccEEEEEEEccccHHHHHHHccEEEccccccEEEEEEEccHHHHHHHHHHHHHHHHcccccEEEccHHHHccccccEEEEEEcc //