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Rickettsia conorii str. Malish 7 (rcon0)
Gene : sohB
DDBJ      :sohB         possible protease sohB
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  380/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:304 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   86->244 3bf0D PDBj 6e-10 30.1 %
:RPS:PDB   86->244 3bezA PDBj 3e-21 26.3 %
:RPS:SCOP  200->244 1tg6A1  c.14.1.1 * 1e-05 8.9 %
:HMM:SCOP  17->244 1y7oA1 c.14.1.1 * 1.6e-35 30.9 %
:RPS:PFM   113->243 PF01343 * Peptidase_S49 9e-20 36.2 %
:HMM:PFM   108->250 PF01343 * Peptidase_S49 7e-35 27.5 142/154  
:BLT:SWISS 26->297 NHAA_BRUME 1e-41 44.3 %
:PROS 82->90|PS00264|NEUROHYPOPHYS_HORM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03083.1 GT:GENE sohB GT:PRODUCT possible protease sohB GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 534892..535806 GB:FROM 534892 GB:TO 535806 GB:DIRECTION + GB:GENE sohB GB:PRODUCT possible protease sohB GB:PROTEIN_ID AAL03083.1 GB:DB_XREF GI:15619624 GB:GENE:GENE sohB LENGTH 304 SQ:AASEQ MNEVNKSTMANAEFDQIITKRQISKLDQLFASVFGNSKEVIAVLRLSGVIGKVSTMQSGLTLESLNALIEKAFKIKKLKALCLIINSPGGSPVQSELIAKRIRDLAEENKIKIYSFIEDMAASGGYWLACSGDRIYALPSSVIGSIGVVSSGFGFHEAINKLGIERRVYTEGKNKSVLDPFKPINKDDLKIIKDLQKQVYEHFIEYVKTRRAGKLTQQDEILFNGEFWAGQTALDYGLIDGIGDIYSVMKEKFGDNIKFQYLCAKQPWLKKKLGMGSKILTDNLANSLIDAVENKIINDKFDMK GT:EXON 1|1-304:0| BL:SWS:NREP 1 BL:SWS:REP 26->297|NHAA_BRUME|1e-41|44.3|271/736| PROS 82->90|PS00264|NEUROHYPOPHYS_HORM|PDOC00237| SEG 67->85|aliekafkikklkalclii| SEG 140->155|ssvigsigvvssgfgf| SEG 186->198|kddlkiikdlqkq| BL:PDB:NREP 1 BL:PDB:REP 86->244|3bf0D|6e-10|30.1|153/476| RP:PDB:NREP 1 RP:PDB:REP 86->244|3bezA|3e-21|26.3|152/465| RP:PFM:NREP 1 RP:PFM:REP 113->243|PF01343|9e-20|36.2|130/153|Peptidase_S49| HM:PFM:NREP 1 HM:PFM:REP 108->250|PF01343|7e-35|27.5|142/154|Peptidase_S49| GO:PFM:NREP 2 GO:PFM GO:0006508|"GO:proteolysis"|PF01343|IPR002142| GO:PFM GO:0008233|"GO:peptidase activity"|PF01343|IPR002142| RP:SCP:NREP 1 RP:SCP:REP 200->244|1tg6A1|1e-05|8.9|45/184|c.14.1.1| HM:SCP:REP 17->244|1y7oA1|1.6e-35|30.9|188/0|c.14.1.1|1/1|ClpP/crotonase| OP:NHOMO 440 OP:NHOMOORG 397 OP:PATTERN -----------------------------------11------------------------111---- --1-----------------------------------11-1----------------------111---1-----------1-1-11--1---111--1111-1----11------1-1111111111111111----11----1-11-111----------11-111111-------1--1---11--1--1---------------1111-----1-11---1111111-1-------------------------------------------------------------------------------------------------------------------1----1----111-2----1--12-1----111111--11111111111-1111111111-11111111111-11111111111111---1111111111--------1---1-21---11111--112111222212221----1----------111211111111111111111111111111111111111111111111111111111111111221-1-21--11-1---------11--------1------------------------------1123121-11-1--21-1111-1-11-1--11111--1------1------------------------------------1--11----------------1-------1---------------1111111122111121---1-1-11--111-111111211121221211111111111111111111111111-11111111-1111111111111111111112222-----------------------------------------------1- ------------------------------------------------------------------------------------------------------------31---------------------------------------------------------------2-1-115---33-------11----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 70.7 SQ:SECSTR #############################ccccccccccEEEEEEEEEEEEcccccTTcEEHHHHHHHHHHHHHcTTEEEEEEEEEEccccHHHHHHHHHHHHHHHHTTccEEEEEEEEEEETHHHHTTTTccEEEEcTTcEEEcccEEEEEEEcHHHHHHTTcccccccccGGGcccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHTTTcTTcEEEHHHHHHTTcccEEcc############################################################ DISOP:02AL 1-3, 26-40, 266-282| PSIPRED ccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEEccccccccccHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEEEccccccccccEEEccccHHHHHHHHcccHHHEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccEEcHHHHHHcccccccccHHHHHHHHHcccEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccc //