[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rickettsia conorii str. Malish 7 (rcon0)
Gene : uup
DDBJ      :uup          ABC transporter ATP-binding protein Uup
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  905/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
c.14.1c.37.1d.41.3
:593 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   11->358,411->485 2ix3A PDBj 2e-23 31.2 %
:RPS:PDB   7->498 3cmvG PDBj 1e-45 8.2 %
:RPS:SCOP  11->193 1sgwA  c.37.1.12 * 4e-19 16.8 %
:RPS:SCOP  287->474 1sgwA  c.37.1.12 * 1e-29 21.5 %
:RPS:SCOP  447->520 1uouA3  d.41.3.1 * 9e-06 16.2 %
:RPS:SCOP  530->588 1q51A  c.14.1.3 * 4e-04 13.2 %
:HMM:SCOP  3->241 1r0wA_ c.37.1.12 * 2.5e-43 26.5 %
:HMM:SCOP  292->485 1ii8.1 c.37.1.12 * 4.5e-48 33.0 %
:RPS:PFM   44->149 PF00005 * ABC_tran 2e-05 32.1 %
:RPS:PFM   213->283 PF04012 * PspA_IM30 2e-04 35.2 %
:RPS:PFM   327->439 PF00005 * ABC_tran 6e-05 29.0 %
:RPS:PFM   536->593 PF08537 * NBP1 4e-04 32.8 %
:HMM:PFM   44->149 PF00005 * ABC_tran 3.3e-17 36.5 104/118  
:HMM:PFM   327->439 PF00005 * ABC_tran 1.7e-17 34.0 106/118  
:HMM:PFM   17->59 PF03193 * DUF258 0.00028 33.3 42/161  
:HMM:PFM   298->340 PF03308 * ArgK 1.6e-05 23.3 43/267  
:BLT:SWISS 12->495 UUP_ECOLI 1e-88 38.5 %
:BLT:SWISS 524->591 PFDB_THEVO 4e-04 32.4 %
:PROS 121->135|PS00211|ABC_TRANSPORTER_1
:PROS 411->425|PS00211|ABC_TRANSPORTER_1
:REPEAT 2|5->244|286->531
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL03725.1 GT:GENE uup GT:PRODUCT ABC transporter ATP-binding protein Uup GT:DATABASE GIB00062CH01 GT:ORG rcon0 GB:ACCESSION GIB00062CH01 GB:LOCATION 1087167..1088948 GB:FROM 1087167 GB:TO 1088948 GB:DIRECTION + GB:GENE uup GB:PRODUCT ABC transporter ATP-binding protein Uup GB:PROTEIN_ID AAL03725.1 GB:DB_XREF GI:15620316 GB:GENE:GENE uup LENGTH 593 SQ:AASEQ MTPIYYIKDGNLSFADKVILSDLELYLYTGDKICLIGRNGCGKSSLMKVISGDYELDNGALFQDPLVTTGYLRQDIAIKTHLTVYDFVLQQTDSTKEIDKYQIDIILEKLQINGTDNLSTYSGGQLRRASLAKALILEPEILLLDEPTNHLDIATIEWLEEFVKSYNGAIICVSHDRTFLSKVTNKIWWLDRGILRKSDKGFKFFDEWQTIIIDQEEAALRKLNKKLSQENEWLNAGVTARRKRNQKRLADLKALRAITQEQTAKLASSTQRVRAELAENIAKSKFIIEADNITFSYKNTKIINNFSFRVKNGEKIGIIGANGSGKSTFIKLLTKQLTPESGKIIYGGNLDISYFDQHREKLEPNHTLQQTLCPTGGDQVFLPHGKTMHVAGYLKQFMFNPKLLNAKTAVLSGGEANRLLLAKILINPGNLLILDEPTNDLDMDSLEILLDILTDYSGTLIVVSHDRDFLDRLVTRTLVFAQGKIHDLTGGYEDYKQYFTTSPIAKKASKPLPLTSQKEPLNKKLSYKYQRLLETLPNYIEKLEISIKHLEKELEDVNLYLDNPQKYNCITSQLINDKKKLDELLNQWLEIQD GT:EXON 1|1-593:0| BL:SWS:NREP 2 BL:SWS:REP 12->495|UUP_ECOLI|1e-88|38.5|478/635| BL:SWS:REP 524->591|PFDB_THEVO|4e-04|32.4|68/124| PROS 121->135|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 411->425|PS00211|ABC_TRANSPORTER_1|PDOC00185| NREPEAT 1 REPEAT 2|5->244|286->531| SEG 131->144|lakalilepeilll| BL:PDB:NREP 1 BL:PDB:REP 11->358,411->485|2ix3A|2e-23|31.2|370/972| RP:PDB:NREP 1 RP:PDB:REP 7->498|3cmvG|1e-45|8.2|489/1167| RP:PFM:NREP 4 RP:PFM:REP 44->149|PF00005|2e-05|32.1|106/123|ABC_tran| RP:PFM:REP 213->283|PF04012|2e-04|35.2|71/218|PspA_IM30| RP:PFM:REP 327->439|PF00005|6e-05|29.0|112/123|ABC_tran| RP:PFM:REP 536->593|PF08537|4e-04|32.8|58/317|NBP1| HM:PFM:NREP 4 HM:PFM:REP 44->149|PF00005|3.3e-17|36.5|104/118|ABC_tran| HM:PFM:REP 327->439|PF00005|1.7e-17|34.0|106/118|ABC_tran| HM:PFM:REP 17->59|PF03193|0.00028|33.3|42/161|DUF258| HM:PFM:REP 298->340|PF03308|1.6e-05|23.3|43/267|ArgK| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 4 RP:SCP:REP 11->193|1sgwA|4e-19|16.8|179/200|c.37.1.12| RP:SCP:REP 287->474|1sgwA|1e-29|21.5|186/200|c.37.1.12| RP:SCP:REP 447->520|1uouA3|9e-06|16.2|74/99|d.41.3.1| RP:SCP:REP 530->588|1q51A|4e-04|13.2|53/271|c.14.1.3| HM:SCP:REP 3->241|1r0wA_|2.5e-43|26.5|238/0|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 292->485|1ii8.1|4.5e-48|33.0|191/370|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 14552 OP:NHOMOORG 1169 OP:PATTERN 22729235AAB99785A343-348B2288545843675576636BA7C59WIE34B49767753A114 97H4GBDFFFE7C7C8855-59338K655656D777CLEF49AD8IDAGC85JGI78B44CC88C9BIMH6B888F88F8CD332454999A1855A-1ABIDB7DBI2C24443446754444A99465A588IA6449C765H6FDFGECC44BB635564985CEKPC656766775A6475844HF56CKZZcZbRSaRabYQPcSVSSONbdUDAEaPGORPPSLUfaHOORQRPLPOPPOPNJJGLLVMGFNNGCLFRHGDDQQKD9CJFMHIPPSTPOQQPRJNKKHKLMJLHJJIIIHIIJFGIHMMOIJJQPQNGYMPeWWWZTYWQUPJZMMINOLWHBISCDF42XZEE87FD59GHIH4F9779788666677A7UPS88AGGBDBHIGGIHIHGGU-89A97C7CIQ76jbbZWVVZfYZVKG4667GGAA9AAIH888888887688667D33112222114544995485444446261236669GEB7CEGIILGDEEEEEDJNHGFFEEKDRB9FE5AABB94576AGIAFB7E78A79A76676777D85F6DELO5G8EEB9ICCD7BBBBAEF7C8677BEAFC78869A9A852466666668884766GGGCIBCAGDG99ABABBC9BAC7DBAEHE2-8476A22-222SHRNDO9MOOMMOOMLK-OLMKNLMKLMONMKKLKKIOSQTRLKOFEIFGGHFFGFHGFFFRKKILKJKA-KEFHHIIEFJIH129878667CBBC68JDNBEBDFCABEA9D98CA9B997958A9ECD9DCHHODFGIIDMOQ8564767758GFDVKKMLKMMRSP55767666655656356AFFBECD22243444a2A34253-3634444565437283--1DJIAA9MBHB37B 1232979-C53378A85756986A7B95544559865756755565675687864665555545647655555675725565556646-8955556768374677C27O9CA85C6D74556A6HF4G4n*F2F7L45-1H578D48343B22c4C55C4BB6AD75779qCK985BBI*GDE57D9EJ6DECCGDGFJ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- DISOP:02AL 236-270, 501-553| PSIPRED cccEEEEEEEEEEEccEEEEEccEEEEEcccEEEEEccccccHHHHHHHHcccccccccEEEEccccEEEEEEEcccccccccHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEEEEEEEccHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHcccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //