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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06895.1
DDBJ      :             binding-protein-dependent transport systems inner membrane component
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  503/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   115->258 2r6gF PDBj 3e-16 38.6 %
:RPS:SCOP  71->286 2r6gF2  f.58.1.1 * 3e-17 24.5 %
:RPS:PFM   118->270 PF00528 * BPD_transp_1 2e-04 29.5 %
:HMM:PFM   106->301 PF00528 * BPD_transp_1 2.7e-15 22.4 161/185  
:BLT:SWISS 42->286 Y4OQ_RHISN 5e-26 31.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06895.1 GT:GENE ABF06895.1 GT:PRODUCT binding-protein-dependent transport systems inner membrane component GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(13040..13972) GB:FROM 13040 GB:TO 13972 GB:DIRECTION - GB:PRODUCT binding-protein-dependent transport systems inner membrane component GB:PROTEIN_ID ABF06895.1 GB:DB_XREF GI:93352806 InterPro:IPR000515 LENGTH 310 SQ:AASEQ MSALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGSPMPHFIGLENFRSVVANPTFWQSLRNALVFTLVSQALVVVLAKALALALVRDFPGKWLVRLLILLPWVAPISLGSIGWLWIFDPVYSIINWTLRAIGLFGPNTWPIWLGQPDLAMASVILVDVWRLLPLATVIILAGMQGIPQDLHDAAAMDGAGFWRRLFRIDVPLLMPVMLVALLFGIVFTLTDMVIIYVLTRGGPYDTTQVLASLAFFTGIQGGDLAEGAAISLFLFPLLVAVVTLLLTVAHRSEVT GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 42->286|Y4OQ_RHISN|5e-26|31.2|240/309| TM:NTM 6 TM:REGION 27->49| TM:REGION 88->110| TM:REGION 127->149| TM:REGION 176->198| TM:REGION 228->250| TM:REGION 282->304| SEG 27->41|ammlapaliyialll| SEG 92->110|lvsqalvvvlakalalalv| SEG 225->237|vpllmpvmlvall| SEG 287->304|lflfpllvavvtllltva| BL:PDB:NREP 1 BL:PDB:REP 115->258|2r6gF|3e-16|38.6|140/490| RP:PFM:NREP 1 RP:PFM:REP 118->270|PF00528|2e-04|29.5|139/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 106->301|PF00528|2.7e-15|22.4|161/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 71->286|2r6gF2|3e-17|24.5|212/244|f.58.1.1| OP:NHOMO 2296 OP:NHOMOORG 538 OP:PATTERN 11--2-11111111113-1111--6--31-3-----------------------2232111121---- ---1V1-3223-1113323-323348333334244414575325LxN27AC4KFJ127--6478A4CFTF36111663----3-----------------------------------------------------56666---64221311-11222222221121333--2-----2----DB254AB-832222222331122222J7332322322715135455349o1-------------------23--11--11111--11---1-2-1--1-----21123323231223-------------222---222274-26111111131232--1223B-2322-6--231--1G---76692-1-------111112-DA91--324426765667777B---5--4-18H--UOOEURKddYRO11---6677657773--------4112--12---------------------------------1-132325776652122233583332224451112--1126-12232547B----1--3--------------1-1--------1111---------222224----------1------------------125-----1-2----------------------1---------26761413333333333-33333333333323333324544411123222222222222225-113333--477777777777---------11111-559111111-----1--1------------111111113---12312-----------111111113122211111111111111-------------------1--------------------------3JB779P8CA-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------2-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 140 STR:RPRED 45.2 SQ:SECSTR ##################################################################################################################THHHHHHHTTHHHHccHHHHHHHHHHHTcccccHHHHHHHH##Tcccc##ccTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGccTHHHHHHHHTccccHHHHHHTTGGGTHHHHHHHHHHHHHHHHTcHHHHHHHccccc#################################################### DISOP:02AL 1-4,6-21,308-311| PSIPRED ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //