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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06901.1
DDBJ      :             DEAD/DEAH box helicase-like protein
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  823/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:227 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->213 2gxsB PDBj 6e-33 42.0 %
:RPS:PDB   18->222 3dkpA PDBj 2e-26 22.4 %
:RPS:SCOP  18->222 1fuuA  c.37.1.19 * 2e-35 26.6 %
:HMM:SCOP  18->223 1wrbA1 c.37.1.19 * 9.5e-46 39.3 %
:RPS:PFM   40->205 PF00270 * DEAD 2e-29 39.4 %
:HMM:PFM   41->204 PF00270 * DEAD 1.7e-34 32.7 162/167  
:BLT:SWISS 16->200 DBPA_ECOLI 7e-41 46.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06901.1 GT:GENE ABF06901.1 GT:PRODUCT DEAD/DEAH box helicase-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 18848..19531 GB:FROM 18848 GB:TO 19531 GB:DIRECTION + GB:PRODUCT DEAD/DEAH box helicase-like protein GB:PROTEIN_ID ABF06901.1 GB:DB_XREF GI:93352812 InterPro:IPR001410 InterPro:IPR011545 LENGTH 227 SQ:AASEQ MRVTKFSASIPLSTGTLFSALPLAPALQVTLTELGWHAINPLQAAMLPEALAGRDLIVQASPGSGRTVAFTVALLHHLDPRRFDVQALVLCPTRERVQHVAQCIRDCVRAARHVKVVALMHGAAMRPQIDSLIHGAHVVVGTPGRVVDHLDAGSLDLRAIGILVIDDAESMLDLGLVDDVGFAASRCPKSRQTLLFSTSFNSDLDPEVERFSRLWLRKPRRIAHLPD GT:EXON 1|1-227:0| BL:SWS:NREP 1 BL:SWS:REP 16->200|DBPA_ECOLI|7e-41|46.5|185/457| BL:PDB:NREP 1 BL:PDB:REP 18->213|2gxsB|6e-33|42.0|193/207| RP:PDB:NREP 1 RP:PDB:REP 18->222|3dkpA|2e-26|22.4|201/240| RP:PFM:NREP 1 RP:PFM:REP 40->205|PF00270|2e-29|39.4|165/167|DEAD| HM:PFM:NREP 1 HM:PFM:REP 41->204|PF00270|1.7e-34|32.7|162/167|DEAD| GO:PFM:NREP 3 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| RP:SCP:NREP 1 RP:SCP:REP 18->222|1fuuA|2e-35|26.6|199/215|c.37.1.19| HM:SCP:REP 18->223|1wrbA1|9.5e-46|39.3|201/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 8787 OP:NHOMOORG 1062 OP:PATTERN ------1111111121-1-----1--------1111111111111111-2112----1111111--11 1111333333332332322-23113322222233333555-32333432444333323--44323335642-1111111131-11111444413221--51554269716--------------222122222212111111111121-1111----12122111-2222111111111111131111--1124555555554555555434444555222325444444454222222222222222222222233333322233333333333222222223333332222222222233333333333332222222223-523655555555553422433334-1-121113334-1111------113-3323322212333333223333333333333333-3333333323223333333333333323333233333324444444435553323------------111111111111111111333324444355555554444445544443455544452344454544555554553343353222222222244573725253214333-444534544333364424--1-------1111111115111522997646B6899ACCBCCCCCCBCBCCBCBB1-2222311111154555555555555555-55555555555555555555555544555555555555454455554555541444556644556114511111333325448323333233333333222222222256666666666666666662222222224AAAA999998BBAA44555555553333232-332222--------11211112---1--11---1--11-11111111------33 JHGHOOJ2tJIFNOPKLMJKKLKMMMKLLILLLKKKJMFKHIJJKLLNLMMNNNJMMKMMMMLJMLNMFNNKMLMMNJNNMMLMMKKK-MRNLLOPPJNLKGOYaa8MqOmckadZlKIHDPaNpjJvD**i2kd*INJIeIQbPHUPJKZG8mLbQRTRvqaUQMMePY*ZWWKFUPa*ZYVOVueq*LxmPNUTWWV ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 99.6 SQ:SECSTR EEccccccccccccHHEHHHHcccHHHHHHHHHTTcccccHHHHHHHHHHHTTccEEEEccTTccHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHTTTccccEEcccHHHHHHTTTcTTccccccEEEEcHHHHHHHHcccccccTTccEEEEccHHHHHHHccHHHHHHHHHcccTTcEEEEEEccccTTccHHHHHHHHHHccccEEEHHcc# DISOP:02AL 1-1,3-3,226-228| PSIPRED cEEEEccccccccccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHccccccccEEEEEEEccHHHHcccHHHHHHHHHHHcccHHcEEEEEEEccccHHHHHHHHHHHHccccEEEEEccc //