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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF06914.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  797/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:268 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->232 2oqrA PDBj 3e-26 32.5 %
:RPS:PDB   28->111 3cwoX PDBj 1e-18 16.9 %
:RPS:PDB   134->232 2d1vA PDBj 8e-18 23.2 %
:RPS:SCOP  26->111 1a0oA  c.23.1.1 * 1e-17 31.4 %
:RPS:SCOP  129->232 1ys6A1  a.4.6.1 * 3e-19 22.3 %
:HMM:SCOP  5->197 1s8nA_ c.23.1.1 * 5.9e-31 31.5 %
:RPS:PFM   29->111 PF00072 * Response_reg 9e-14 43.9 %
:RPS:PFM   155->211 PF00486 * Trans_reg_C 2e-11 49.1 %
:HMM:PFM   11->118 PF00072 * Response_reg 6.9e-22 31.8 107/112  
:HMM:PFM   155->231 PF00486 * Trans_reg_C 7.7e-20 42.9 77/77  
:BLT:SWISS 28->232 REGX3_MYCTU 9e-26 32.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF06914.1 GT:GENE ABF06914.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 32264..33070 GB:FROM 32264 GB:TO 33070 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABF06914.1 GB:DB_XREF GI:93352825 InterPro:IPR001789 InterPro:IPR001867 LENGTH 268 SQ:AASEQ MTRMGLRVASLEDDAAEAARIREIVTAEGHECVTFADGRRMLVTLRKVTFDLLLLDWHVPHVSGREVLDWVRAHLDPRIPVMFLTGRDTEADIVATLSAGADDYMVKPIRPRELGARIAALLRRAYPDSRQPDDGRLTWGCFRFDAVTREATCHGQEVRLTPKEFEVALLLFRNEGRAVPREYMLAAIWGKELPPLSRTIDTHVSRVRTKLGLWEHNGVRLQPLYTHGYRLELLTTPGMAPPSTPPPTPPSTPPSQKKKGTRRCLSAN GT:EXON 1|1-268:0| BL:SWS:NREP 1 BL:SWS:REP 28->232|REGX3_MYCTU|9e-26|32.5|203/227| SEG 12->24|eddaaeaarirei| SEG 112->125|relgariaallrra| SEG 241->255|ppstppptppstpps| BL:PDB:NREP 1 BL:PDB:REP 28->232|2oqrA|3e-26|32.5|203/226| RP:PDB:NREP 2 RP:PDB:REP 28->111|3cwoX|1e-18|16.9|83/236| RP:PDB:REP 134->232|2d1vA|8e-18|23.2|99/103| RP:PFM:NREP 2 RP:PFM:REP 29->111|PF00072|9e-14|43.9|82/111|Response_reg| RP:PFM:REP 155->211|PF00486|2e-11|49.1|57/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 11->118|PF00072|6.9e-22|31.8|107/112|Response_reg| HM:PFM:REP 155->231|PF00486|7.7e-20|42.9|77/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 26->111|1a0oA|1e-17|31.4|86/128|c.23.1.1| RP:SCP:REP 129->232|1ys6A1|3e-19|22.3|103/106|a.4.6.1| HM:SCP:REP 5->197|1s8nA_|5.9e-31|31.5|184/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 6026 OP:NHOMOORG 804 OP:PATTERN -------------------------------------------------------------------- 5995A443556532A8888-88447A888887CAAA7AA967983656353495933711EDC6D5CIBH6233333246E76122324463-5-----2174339-857---------------21222312321ABBGGC68F4K7G977676894437778839EDH42434222323327843311-84BIIJIJHLKCKKMJLICA6679JKO689H4DC766766SL38678786887778866644837288242144433A9352474243787554564466666666666233333333333353344433335HCDKHHHIJHJEGB9NII7AC7GCA4799F32ROC77333536455116A13AAA64354496DAB85A7977977777777779-66966B866E4-GAAEB9BGGCBADE58645583892657777777767757876-11---------11--11111111------268436A96CJLMNQIGCCC7JJHKEFFE8ELIFIIIO-1FGK75A98FA9AC4CEB555583-------4327AC57622221472223-A77748656534396162--22---------------3232644BC7678B5976C5986699BBB9ADADADC--22223------788C7C98779899A88-7A9888888A787888887C9B785677477777768767677C775777851999999998999--1722222222258C8B4332222333331147656756555B7GDGGEHOKCFIKGAEEG2212132123998B888887BCABGI98C889993333--61223344----------1-------------------------2632332344243 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-1-------1-1------------6-----5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 208 STR:RPRED 77.6 SQ:SECSTR ########################HTccEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHEcccccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHHHHHTTccEEEEEEcHHHHHHcccEEETTEEEETTTTEEEETTEEccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHcccTTccccEEEETTTEEEEc#################################### DISOP:02AL 1-4,122-137,236-261,266-269| PSIPRED ccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHcccccccccccEEEccEEEEcccEEEEEccEEEcccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEHHHHHHHHHHcccccccccEEEEEccccEEEccccccccccccccccccccccccHHHHHHHHccccc //